Integrative Orthology Viewer: ST01G008490 (Solanum tuberosum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum tuberosum | Orthologous gene family | ST01G008490 ST04G006660 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | ST01G008490 | 1 | ||
Tree-based ortholog | ST01G008490 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00009G03190 ATR_00079G00250 ATR_00310G00010 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00079G00250 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_03962G00010 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G17590 AL1G50810 AL2G28040 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G17590 | 1 | ||
Tree-based ortholog | 1-to-1 | AL1G17580 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G16710 AT1G55970 AT1G67220 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G16710 | 1 | ||
Tree-based ortholog | 1-to-1 | AT1G16705 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G12830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G12830 | 1 | ||
Tree-based ortholog | 1-to-1 | BV0G12780 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G00210 BR02G25080 BR03G33260 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G25080 | 1 | ||
Tree-based ortholog | 1-to-1 | BR08G26830 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G15720 CRU_001G42410 CRU_002G12680 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G15720 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_001G15710 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00010G00150 CP00818G00030 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00010G00150 | 1 | ||
Tree-based ortholog | 1-to-many | CP00818G00030 CP00179G00360 CP04293G00020 | 3 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G10540 | 1 | |
Tree-based ortholog | 1-to-1 | CR03G10540 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G02140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G02140 | 1 | ||
Tree-based ortholog | 1-to-1 | CL05G11750 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00026G01930 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00026G01930 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00026G01920 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00021G00050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G00050 | 1 | ||
Tree-based ortholog | 1-to-many | CM00078G00050 CM00038G02030 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G34740 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G34740 | 1 | ||
Tree-based ortholog | 1-to-1 | EG0006G34770 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G17410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G17410 | 1 | ||
Tree-based ortholog | 1-to-many | FV6G41070 FV0G27860 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G00230 GM08G24290 GM15G00241 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G24290 GM07G00230 | 2 | ||
Tree-based ortholog | 1-to-many | GM07G00240 GM08G24280 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR09G12170 GR10G13570 GR10G22210 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G00140 | 1 | ||
Tree-based ortholog | 1-to-1 | GR09G12160 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G032230 | 1 | |
Tree-based ortholog | 1-to-1 | LJ3G029170 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G010390 MD00G063090 MD00G363750 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G016130 | 1 | ||
Tree-based ortholog | 1-to-1 | MD00G458540 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01745G00030 ME01745G00040 ME06871G00910 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME01745G00040 ME01745G00030 | 2 | ||
Tree-based ortholog | 1-to-1 | ME11240G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT4G005050 MT5G017020 MT6G017000 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G005050 | 1 | ||
Tree-based ortholog | 1-to-1 | MT00G23450 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G04490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G04490 | 1 | ||
Tree-based ortholog | 1-to-many | OS02G04510 OS06G49120 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G03370 | 1 | |
Tree-based ortholog | 1-to-many | OL04G03370 OL15G02470 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00193G00260 PP00462G00090 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00193G00260 PP00462G00090 | 2 | ||
Tree-based ortholog | 1-to-many | PP00106G00330 PP00326G00280 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT07G00340 PT14G00050 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G00050 | 1 | ||
Tree-based ortholog | 1-to-1 | PT19G03680 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G03890 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G01530 | 1 | ||
Tree-based ortholog | 1-to-many | PPE_003G01530 PPE_003G01520 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30169G00040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G00040 | 1 | ||
Tree-based ortholog | 1-to-1 | RC30169G00050 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G008120 SL02G089790 SL04G008610 | 3 | |
Anchor point | N/A | SL01G008120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G008120 | 1 | ||
Tree-based ortholog | 1-to-1 | SL01G008120 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G14860 TP1G41590 TP3G11140 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G34050 | 1 | ||
Tree-based ortholog | 1-to-1 | TP1G14870 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G04830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G04830 | 1 | ||
Tree-based ortholog | 1-to-many | TC0010G13910 TC0006G04840 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV09G08780 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV09G08780 | 1 | ||
Tree-based ortholog | 1-to-1 | VV09G08770 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G28260 ZM04G41110 ZM05G19100 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G19100 ZM04G41110 | 2 | ||
Tree-based ortholog | 1-to-many | ZM03G15740 ZM01G28260 | 2 |