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Integrative Orthology Viewer:
SL12G094620
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL12G094620 | 1 |  |
| Anchor point | SL02G082760 SL04G082460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL12G094620 | 1 | ||
| Tree-based ortholog | SL12G094620 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00001G00080 ATR_00001G00070 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00001G00080 | 1 | ||
| Arabidopsis lyrata | Anchor point | many-to-1 | AL1G21770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G05870 | 1 | ||
| Tree-based ortholog | 1-to-many | AL7G05870 AL1G21770 | 2 | ||
| Arabidopsis thaliana | Anchor point | many-to-1 | AT1G20620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G35090 | 1 | ||
| Tree-based ortholog | 1-to-many | AT4G35090 AT1G20630 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G05050 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G05020 | 1 | ||
| Brassica rapa | Anchor point | many-to-many | BR07G10320 BR08G25070 BR06G14880 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G03180 | 1 | ||
| Tree-based ortholog | 1-to-many | BR01G03180 BR08G13510 BR03G54580 ... | 5 | ||
| Capsella rubella | Anchor point | many-to-1 | CRU_001G19270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G04900 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_007G04900 CRU_001G19280 | 2 | ||
| Carica papaya | Anchor point | many-to-many | CP00006G03310 CP00026G01880 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00026G01880 | 1 | ||
| Tree-based ortholog | 1-to-many | CP00075G00570 CP00026G01880 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G11950 | 1 | |
| Tree-based ortholog | 1-to-1 | CR09G11950 | 1 | ||
| Citrullus lanatus | Anchor point | many-to-many | CL08G09200 CL11G12640 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G12640 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL08G09200 | 1 | ||
| Citrus sinensis | Anchor point | many-to-1 | CS00002G06650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G06660 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00002G06660 | 1 | ||
| Cucumis melo | Anchor point | many-to-many | CM00029G04060 CM00096G00380 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00029G04060 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00096G00380 | 1 | ||
| Eucalyptus grandis | Anchor point | many-to-many | EG0006G30320 EG0006G14470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0006G14480 EG0006G14470 | 2 | ||
| Tree-based ortholog | 1-to-many | EG0006G14490 EG0006G30350 EG0215G00010 ... | 4 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G40900 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G40900 | 1 | ||
| Glycine max | Anchor point | many-to-many | GM06G02040 GM14G39810 GM04G01920 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G02040 GM04G01920 | 2 | ||
| Tree-based ortholog | 1-to-many | GM14G39810 GM17G38140 GM04G01920 ... | 4 | ||
| Gossypium raimondii | Anchor point | many-to-many | GR02G11590 GR03G00280 GR09G18760 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR02G11590 GR09G18760 | 2 | ||
| Tree-based ortholog | 1-to-many | GR09G18760 GR02G11590 GR03G00280 ... | 4 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G030830 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G030830 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD06G000920 MD00G150950 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G150950 MD00G150890 MD06G000920 ... | 5 | ||
| Manihot esculenta | Anchor point | many-to-many | ME02943G01030 ME06512G01900 ME07520G03340 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME02943G01050 ME08376G00020 | 2 | ||
| Tree-based ortholog | 1-to-many | ME07520G03340 ME06512G01900 ME02943G01050 ... | 4 | ||
| Medicago truncatula | Anchor point | many-to-1 | MT3G115370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G115370 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT3G115370 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS06G51150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G03910 | 1 | ||
| Tree-based ortholog | 1-to-many | OS03G03910 OS06G51150 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00003G01320 PP00422G00060 | 2 | |
| Tree-based ortholog | 1-to-many | PP00292G00130 PP00003G01770 PP00223G00410 | 3 | ||
| Populus trichocarpa | Anchor point | many-to-many | PT05G10040 PT02G00980 PT05G25160 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G00980 | 1 | ||
| Tree-based ortholog | 1-to-many | PT02G00980 PT05G25160 PT05G10040 ... | 4 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_005G01190 PPE_005G01200 | 2 | |
| Tree-based ortholog | 1-to-many | PPE_005G01200 PPE_005G01190 | 2 | ||
| Ricinus communis | Anchor point | many-to-1 | RC30170G06850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29830G00550 | 1 | ||
| Tree-based ortholog | 1-to-many | RC29830G00550 RC30170G06850 | 2 | ||
| Solanum tuberosum | Anchor point | many-to-many | ST04G035910 ST12G027890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G027890 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST12G027890 | 1 | ||
| Thellungiella parvula | Anchor point | many-to-1 | TP1G18320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G32860 | 1 | ||
| Tree-based ortholog | 1-to-many | TP7G32860 TP1G18330 | 2 | ||
| Theobroma cacao | Anchor point | many-to-many | TC0001G00600 TC0008G05800 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G05800 | 1 | ||
| Tree-based ortholog | 1-to-many | TC0008G05800 TC0001G00600 | 2 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV18G12280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G12260 | 1 | ||
| Tree-based ortholog | 1-to-many | VV04G06230 VV00G02910 VV18G12280 ... | 4 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G16210 | 1 | |
| Tree-based ortholog | 1-to-many | ZM01G02380 ZM05G16210 | 2 |