Integrative Orthology Viewer: SL12G010780 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL12G005510 SL12G010780 SL12G010880 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | SL12G010880 SL12G005510 SL12G010780 | 3 | ||
Tree-based ortholog | SL12G010880 SL12G010780 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00021G01500 | 1 | |
Tree-based ortholog | many-to-many | ATR_00021G01500 ATR_00034G00180 ATR_00019G03440 ... | 5 | ||
Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G15860 | 1 | |
Tree-based ortholog | many-to-many | AL1G48270 AL3G15860 AL4G22800 ... | 13 | ||
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G53190 | 1 | |
Tree-based ortholog | many-to-many | AT1G53190 AT3G15070 AT2G37150 ... | 15 | ||
Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G11110 | 1 | |
Tree-based ortholog | many-to-many | BV4G05500 BV7G14240 BV0G33340 ... | 7 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G16910 | 1 | |
Tree-based ortholog | many-to-many | BR06G01260 BR05G16910 BR05G27990 ... | 20 | ||
Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G40440 | 1 | |
Tree-based ortholog | many-to-many | CRU_001G40440 CRU_003G13990 CRU_004G18450 ... | 13 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00841G00020 | 1 | |
Tree-based ortholog | many-to-many | CP00841G00020 CP00045G00530 CP00053G00590 ... | 12 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR11G03690 | 1 | |
Tree-based ortholog | many-to-1 | CR10G05410 | 1 | ||
Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL07G11310 | 1 | |
Tree-based ortholog | many-to-many | CL11G11670 CL07G11310 CL08G12460 ... | 5 | ||
Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00076G00120 | 1 | |
Tree-based ortholog | many-to-many | CS00076G00120 CS00191G00070 CS00025G00540 ... | 8 | ||
Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00014G01940 | 1 | |
Tree-based ortholog | many-to-many | CM00027G00260 CM00014G05540 CM01596G03420 ... | 5 | ||
Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G08920 | 1 | |
Tree-based ortholog | many-to-many | EG0006G09570 EG0011G27110 EG0003G16010 ... | 7 | ||
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G17810 | 1 | |
Tree-based ortholog | many-to-many | FV3G17810 FV6G48520 FV2G36480 ... | 7 | ||
Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM10G05845 GM19G36400 GM13G20204 | 3 | |
Tree-based ortholog | many-to-many | GM12G20230 GM06G34970 GM06G35010 ... | 27 | ||
Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G32560 | 1 | |
Tree-based ortholog | many-to-many | GR13G17230 GR02G06560 GR07G32560 ... | 19 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G063970 | 1 | |
Tree-based ortholog | many-to-many | LJ1G063970 LJ2G010710 | 2 | ||
Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD04G007290 | 1 | |
Tree-based ortholog | many-to-many | MD00G046880 MD11G023200 MD12G011150 ... | 12 | ||
Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME06611G00090 ME03741G00710 | 2 | |
Tree-based ortholog | many-to-many | ME03741G00710 ME06611G00090 ME03874G00180 ... | 9 | ||
Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT2G078450 | 1 | |
Tree-based ortholog | many-to-many | MT2G076240 MT2G076290 MT2G078440 ... | 21 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G07070 | 1 | |
Tree-based ortholog | many-to-many | OS05G07070 OS01G06590 OS06G48040 ... | 12 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL16G00600 | 1 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00162G00360 PP00254G00180 | 2 | |
Tree-based ortholog | many-to-many | PP00254G00180 PP00162G00360 | 2 | ||
Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT07G04550 PT05G13990 | 2 | |
Tree-based ortholog | many-to-many | PT01G37370 PT11G09710 PT10G22070 ... | 12 | ||
Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G14730 | 1 | |
Tree-based ortholog | many-to-many | PPE_004G16520 PPE_006G24700 PPE_001G46370 ... | 7 | ||
Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30209G00210 | 1 | |
Tree-based ortholog | many-to-many | RC30209G00210 RC30078G01430 RC29848G00050 ... | 7 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST10G024030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST12G005360 | 1 | ||
Tree-based ortholog | many-to-1 | ST10G024030 | 1 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G13270 | 1 | |
Tree-based ortholog | many-to-many | TP1G39770 TP3G13270 TP4G19460 ... | 12 | ||
Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0007G09410 | 1 | |
Tree-based ortholog | many-to-many | TC0007G09410 TC0005G05460 TC0010G06760 ... | 8 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV19G02250 VV03G08880 | 2 | |
Tree-based ortholog | many-to-many | VV03G08880 VV19G02250 VV08G02640 ... | 14 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM03G04440 ZM08G03820 | 2 | |
Tree-based ortholog | many-to-many | ZM06G19060 ZM03G04440 ZM08G03820 ... | 15 |