Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL09G061280
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL09G061280 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL09G061280 | 1 | ||
| Tree-based ortholog | SL09G061280 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | N/A | ATR_00067G01720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00126G00330 | 1 | ||
| Tree-based ortholog | 1-to-many | ATR_00126G00330 ATR_00067G01720 ATR_01954G00010 | 3 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G11990 | 1 | |
| Anchor point | N/A | AL4G17800 AL8G11990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G11990 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL8G11990 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G48820 | 1 | |
| Anchor point | N/A | AT2G32710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G48820 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT5G48820 | 1 | ||
| Beta vulgaris | Anchor point | N/A | BV7G14680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G14680 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV7G14680 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR06G30970 BR09G04730 | 2 | |
| Anchor point | N/A | BR05G11500 BR03G16300 BR04G19460 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G04730 | 1 | ||
| Tree-based ortholog | 1-to-many | BR06G30970 BR09G04730 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G08440 | 1 | |
| Anchor point | N/A | CRU_004G13620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G08440 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_008G08440 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00008G01520 | 1 | |
| Anchor point | N/A | CP00008G01520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00494G00040 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00008G01520 | 1 | ||
| Citrullus lanatus | Anchor point | N/A | CL07G00420 CL05G03680 CL09G08520 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G03680 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL09G08520 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00029G00570 | 1 | |
| Anchor point | N/A | CS00029G00570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00029G00570 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00029G00570 | 1 | ||
| Cucumis melo | Anchor point | N/A | CM00046G00250 CM00006G04110 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G04110 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00046G00250 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G17910 | 1 | |
| Anchor point | N/A | EG0011G17910 EG0008G00620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G17910 | 1 | ||
| Tree-based ortholog | 1-to-many | EG0008G16580 EG0007G10690 EG0011G17910 ... | 4 | ||
| Fragaria vesca | Anchor point | N/A | FV2G15050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G07920 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV2G15050 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM08G46890 GM18G36820 | 2 | |
| Anchor point | N/A | GM18G36820 GM08G46890 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G46890 GM18G36820 | 2 | ||
| Tree-based ortholog | 1-to-many | GM08G46890 GM18G36820 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR04G22550 | 1 | |
| Anchor point | N/A | GR04G22550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G22180 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR04G22550 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ2G024050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G024050 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ4G012370 | 1 | ||
| Malus domestica | Anchor point | N/A | MD10G012320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G015140 | 1 | ||
| Tree-based ortholog | 1-to-1 | MD10G012320 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME08287G00150 | 1 | |
| Anchor point | N/A | ME08287G00150 ME03332G01420 ME02421G00440 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08287G00150 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME08287G00150 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT7G057920 MT7G058390 | 2 | |
| Anchor point | N/A | MT7G057920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G058390 MT7G057920 | 2 | ||
| Tree-based ortholog | 1-to-many | MT7G057920 MT7G058390 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G04490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G04490 | 1 | ||
| Tree-based ortholog | 1-to-many | OS11G40030 OS03G04490 OS10G33310 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT02G24210 | 1 | |
| Anchor point | N/A | PT02G24210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G24210 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT02G24210 | 1 | ||
| Prunus persica | Anchor point | N/A | PPE_008G21860 PPE_001G00600 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G21860 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_008G21860 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30204G00340 | 1 | |
| Anchor point | N/A | RC30204G00340 RC29904G00720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30204G00340 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30204G00340 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST09G017820 | 1 | |
| Anchor point | N/A | ST09G017820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G017820 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST09G017820 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G19210 | 1 | |
| Anchor point | N/A | TP4G15050 TP2G19210 TP3G22550 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G19210 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP2G19210 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G22140 | 1 | |
| Anchor point | N/A | TC0001G22140 TC0004G20990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G22140 | 1 | ||
| Tree-based ortholog | 1-to-many | TC0002G09450 TC0001G05140 TC0001G22140 ... | 4 | ||
| Vitis vinifera | Anchor point | N/A | VV07G12880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G12880 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV07G12880 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G02910 ZM09G28210 | 2 | |
| Tree-based ortholog | 1-to-many | ZM04G02170 ZM09G01490 ZM01G02910 ... | 6 |