Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL06G053200
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL06G053200 | 1 |  |
| Anchor point | SL03G082580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL06G053200 | 1 | ||
| Tree-based ortholog | SL06G053200 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | 1-to-1 | ATR_00027G00270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00027G00270 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00027G00270 | 1 | ||
| Arabidopsis lyrata | Anchor point | 1-to-many | AL5G18490 AL6G24460 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G24460 | 1 | ||
| Tree-based ortholog | 1-to-many | AL6G24480 AL5G18490 AL6G24470 | 3 | ||
| Arabidopsis thaliana | Anchor point | 1-to-many | AT5G24400 AT3G49360 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G24400 | 1 | ||
| Tree-based ortholog | 1-to-many | AT5G24420 AT3G49360 AT5G24410 | 3 | ||
| Beta vulgaris | Anchor point | 1-to-1 | BV3G01250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV3G01270 BV3G01260 | 2 | ||
| Tree-based ortholog | 1-to-many | BV3G01270 BV3G01260 | 2 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR06G25740 BR09G02860 | 2 | |
| Tree-based ortholog | 1-to-many | BR06G25770 BR06G25790 BR06G25800 ... | 5 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G21550 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_006G21570 CRU_006G21560 | 2 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00003G01400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G01400 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00003G01400 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G07500 | 1 | |
| Tree-based ortholog | 1-to-many | CR08G03520 CR01G07500 | 2 | ||
| Citrullus lanatus | Anchor point | 1-to-1 | CL01G00070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G00080 | 1 | ||
| Tree-based ortholog | 1-to-many | CL01G00070 CL01G00080 | 2 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00019G01900 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00912G00030 | 1 | ||
| Cucumis melo | Anchor point | 1-to-1 | CM00005G08940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G08940 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00005G08950 CM00005G08940 | 2 | ||
| Eucalyptus grandis | Anchor point | 1-to-many | EG0001G11560 EG0011G03670 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G11560 | 1 | ||
| Tree-based ortholog | 1-to-many | EG0001G11560 EG0011G00110 EG0011G00090 ... | 4 | ||
| Fragaria vesca | Anchor point | 1-to-1 | FV7G35300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G35300 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV7G35300 | 1 | ||
| Glycine max | Anchor point | 1-to-many | GM04G40990 GM06G13860 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G40990 GM06G13860 | 2 | ||
| Tree-based ortholog | 1-to-many | GM14G32190 GM14G32220 GM06G13860 ... | 4 | ||
| Gossypium raimondii | Anchor point | 1-to-1 | GR08G26610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G26610 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR08G26610 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G013150 | 1 | |
| Tree-based ortholog | 1-to-many | LJ1G013130 LJ1G013150 | 2 | ||
| Malus domestica | Anchor point | 1-to-many | MD07G020480 MD01G022400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD01G022400 MD07G020480 MD00G104590 | 3 | ||
| Tree-based ortholog | 1-to-many | MD00G104590 MD01G022400 MD07G020480 | 3 | ||
| Manihot esculenta | Anchor point | 1-to-many | ME07330G00040 ME02895G00020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07330G00040 | 1 | ||
| Tree-based ortholog | 1-to-many | ME07330G00040 ME02895G00020 | 2 | ||
| Medicago truncatula | Anchor point | 1-to-1 | MT3G092110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G092110 | 1 | ||
| Tree-based ortholog | 1-to-many | MT1G028330 MT1G028320 MT3G092110 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G35970 | 1 | |
| Tree-based ortholog | 1-to-many | OS09G35970 OS08G43370 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL15G01360 | 1 | |
| Tree-based ortholog | 1-to-many | OL16G01140 OL15G01360 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00001G00580 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00001G00580 | 1 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT12G02440 PT15G00720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G02440 PT15G00720 | 2 | ||
| Tree-based ortholog | 1-to-many | PT15G00840 PT12G02010 PT12G02440 ... | 5 | ||
| Prunus persica | Anchor point | 1-to-1 | PPE_002G30280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G30280 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_002G30280 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC30213G00040 RC30213G00030 | 2 | |
| Tree-based ortholog | 1-to-many | RC30213G00040 RC30213G00030 | 2 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST06G016550 | 1 | |
| Anchor point | 1-to-many | ST03G012670 ST06G016550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G016550 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST06G016550 | 1 | ||
| Thellungiella parvula | Anchor point | 1-to-1 | TP5G12710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G22930 | 1 | ||
| Tree-based ortholog | 1-to-many | TP2G22910 TP5G12710 TP2G22920 | 3 | ||
| Theobroma cacao | Anchor point | 1-to-1 | TC0003G20570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G20570 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0003G20570 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV16G09550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G09550 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV16G09550 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G42060 | 1 | |
| Tree-based ortholog | 1-to-many | ZM02G42060 ZM01G37160 | 2 |