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Integrative Orthology Viewer:
SL05G056240
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL04G015370 SL05G056240 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL05G056240 | 1 | ||
| Tree-based ortholog | SL05G056240 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00053G00870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00053G00870 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00053G00870 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G09790 AL7G33330 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G09790 | 1 | ||
| Tree-based ortholog | 1-to-many | AL7G33330 AL2G09790 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G65290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G65290 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT1G65290 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV4G14910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G14910 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV4G14910 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G09190 BR02G17460 BR07G23500 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR00G09190 | 1 | ||
| Tree-based ortholog | 1-to-many | BR00G09190 BR02G17460 BR07G23500 | 3 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_002G10250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G10250 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_002G10250 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP01128G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00052G00620 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP01128G00020 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR16G05590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G05590 | 1 | ||
| Tree-based ortholog | 1-to-1 | CR16G05590 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL03G11090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G11090 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL03G11090 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00150G00050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00150G00050 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00150G00050 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00006G03580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CM00006G03580 CM00006G03590 | 2 | ||
| Tree-based ortholog | 1-to-many | CM00006G03590 CM00006G03580 CM00006G03570 | 3 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G12070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G12070 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0002G12070 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G00090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G00090 | 1 | ||
| Tree-based ortholog | 1-to-many | FV6G00090 FV3G17350 FV4G16450 | 3 | ||
| Glycine max | Orthologous gene family | many-to-many | GM09G38400 GM18G47950 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G47950 GM09G38400 | 2 | ||
| Tree-based ortholog | 1-to-many | GM18G47950 GM09G38400 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G08090 GR02G08100 GR13G11140 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G11140 GR02G08090 GR02G08100 | 3 | ||
| Tree-based ortholog | 1-to-many | GR02G08090 GR13G11140 GR02G08100 | 3 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G035380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G035380 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G035380 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G246800 MD04G020020 MD12G025350 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G246800 MD12G025350 MD04G020020 | 3 | ||
| Tree-based ortholog | 1-to-many | MD04G020020 MD00G246800 MD12G025350 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03219G00040 ME06711G00170 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03219G00040 ME06711G00170 | 2 | ||
| Tree-based ortholog | 1-to-1 | ME03219G00040 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G080390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G080390 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT7G080390 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G22950 OS05G31290 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G22950 | 1 | ||
| Tree-based ortholog | 1-to-many | OS05G31290 OS03G22950 | 2 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL17G01440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL17G01440 | 1 | ||
| Tree-based ortholog | 1-to-1 | OL17G01440 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00009G01430 PP00049G00780 PP00073G00070 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00049G00780 PP00009G01430 PP00073G00070 | 3 | ||
| Tree-based ortholog | 1-to-many | PP00073G00070 PP00049G00780 PP00009G01430 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT13G08450 PT19G05530 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G08450 PT19G05530 | 2 | ||
| Tree-based ortholog | 1-to-many | PT19G05530 PT13G08450 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G36570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G36570 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_006G36570 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29929G00530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G00530 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29929G00530 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST02G031560 ST04G013040 ST05G029440 | 3 | |
| Anchor point | N/A | ST05G029440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST02G031560 ST05G029440 | 2 | ||
| Tree-based ortholog | 1-to-many | ST05G029440 ST02G031560 | 2 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP5G19950 TP7G05890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G05890 | 1 | ||
| Tree-based ortholog | 1-to-many | TP7G05890 TP5G19950 | 2 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G39780 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G18720 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV04G03030 | 1 | |
| Anchor point | N/A | VV04G03030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G03030 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV04G03030 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM06G23200 ZM09G26590 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G26590 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM06G23200 ZM09G26590 | 2 |