Integrative Orthology Viewer: SL05G015610 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL05G015610 SL07G047770 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | SL05G015610 | 1 | ||
Tree-based ortholog | SL05G015610 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00013G00340 ATR_00028G00830 | 2 | |
Anchor point | N/A | ATR_00013G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00013G00340 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00013G00340 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G28420 AL7G32720 | 2 | |
Anchor point | N/A | AL1G28420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G28420 | 1 | ||
Tree-based ortholog | 1-to-1 | AL1G28420 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G27320 AT5G35750 | 2 | |
Anchor point | N/A | AT1G27320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G27320 | 1 | ||
Tree-based ortholog | 1-to-1 | AT1G27320 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G06420 BV6G11440 | 2 | |
Anchor point | N/A | BV6G11440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G11440 | 1 | ||
Tree-based ortholog | 1-to-1 | BV6G11440 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G09450 BR03G38680 BR07G07460 | 3 | |
Anchor point | N/A | BR07G07460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G07460 | 1 | ||
Tree-based ortholog | 1-to-1 | BR07G07460 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G24820 CRU_007G30160 | 2 | |
Anchor point | N/A | CRU_001G24820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G24820 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_001G24820 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00043G00640 CP00136G00200 | 2 | |
Anchor point | N/A | CP00043G00640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00043G00640 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00043G00640 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR13G02200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR13G02200 CR02G01610 | 2 | ||
Tree-based ortholog | 1-to-many | CR02G01610 CR13G02200 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G02700 CL06G02180 | 2 | |
Anchor point | N/A | CL06G02180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G02180 | 1 | ||
Tree-based ortholog | 1-to-1 | CL06G02180 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00003G00410 | 1 | |
Anchor point | N/A | CS00003G00410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G00410 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00003G00410 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00052G00880 | 1 | |
Anchor point | N/A | CM00052G00880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00052G00880 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00052G00880 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G08320 EG0002G29140 EG0006G36920 ... | 4 | |
Anchor point | N/A | EG0008G37400 EG0002G29140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G37430 | 1 | ||
Tree-based ortholog | 1-to-many | EG0006G36920 EG0002G29140 EG0008G37430 | 3 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G12990 FV3G03780 FV3G07530 | 3 | |
Anchor point | N/A | FV0G12990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G12990 | 1 | ||
Tree-based ortholog | 1-to-1 | FV0G12990 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G28070 GM07G19620 GM08G11060 | 3 | |
Anchor point | N/A | GM05G28070 GM08G11060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G28070 GM08G11060 | 2 | ||
Tree-based ortholog | 1-to-many | GM08G11060 GM05G28070 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G19240 GR02G18220 GR05G16560 ... | 5 | |
Anchor point | N/A | GR05G16560 GR02G18220 GR08G16560 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G16560 | 1 | ||
Tree-based ortholog | 1-to-many | GR08G16560 GR02G18220 GR05G16560 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G003090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G003090 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ4G003090 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G259180 MD13G009250 MD16G007480 | 3 | |
Anchor point | N/A | MD13G009250 MD16G007480 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD13G009250 | 1 | ||
Tree-based ortholog | 1-to-many | MD16G007480 MD13G009250 MD16G000420 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03219G00590 ME03317G00090 ME06711G00760 ... | 4 | |
Anchor point | N/A | ME06711G00760 ME03219G00590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06711G00760 ME03219G00590 | 2 | ||
Tree-based ortholog | 1-to-many | ME03219G00590 ME06711G00760 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G085130 MT8G080770 | 2 | |
Anchor point | N/A | MT3G085130 MT8G080770 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G085130 | 1 | ||
Tree-based ortholog | 1-to-many | MT8G080770 MT3G085130 MT5G044100 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G50860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G69920 | 1 | ||
Tree-based ortholog | 1-to-1 | OS01G69920 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL09G02040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G02040 | 1 | ||
Tree-based ortholog | 1-to-1 | OL09G02040 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00252G00190 PP00050G00500 PP00194G00390 | 3 | |
Tree-based ortholog | 1-to-many | PP00050G00500 PP00194G00390 PP00252G00190 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G05740 PT03G17100 PT14G16470 | 3 | |
Anchor point | N/A | PT01G05740 PT03G17100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G17100 PT01G05740 | 2 | ||
Tree-based ortholog | 1-to-many | PT01G05740 PT03G17100 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G23370 PPE_003G18250 | 2 | |
Anchor point | N/A | PPE_001G23370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G23370 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_001G23370 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29597G00150 RC29929G01380 | 2 | |
Anchor point | N/A | RC29929G01380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G01380 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29929G01380 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST05G016490 ST07G017910 | 2 | |
Anchor point | N/A | ST05G016490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G016490 | 1 | ||
Tree-based ortholog | 1-to-1 | ST05G016490 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G23560 TP3G23540 | 2 | |
Anchor point | N/A | TP1G23560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G23560 | 1 | ||
Tree-based ortholog | 1-to-1 | TP1G23560 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G18540 TC0002G20130 | 2 | |
Anchor point | N/A | TC0002G20130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G20130 | 1 | ||
Tree-based ortholog | 1-to-1 | TC0002G20130 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV01G04890 | 1 | |
Anchor point | N/A | VV01G04890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G04890 | 1 | ||
Tree-based ortholog | 1-to-1 | VV01G04890 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G50910 ZM04G24270 ZM05G05320 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G22590 | 1 | ||
Tree-based ortholog | 1-to-many | ZM03G22590 ZM08G28870 | 2 |