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Integrative Orthology Viewer:
SL04G082520
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL04G082520 SL12G094670 | 2 |  |
| Anchor point | SL12G094670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL04G082520 | 1 | ||
| Tree-based ortholog | SL04G082520 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00044G01810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00044G01810 | 1 | ||
| Tree-based ortholog | 1-to-many | ATR_00055G01380 ATR_00049G00440 ATR_00044G01810 | 3 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G03250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G03250 | 1 | ||
| Tree-based ortholog | 1-to-many | AL1G26210 AL5G06370 AL7G37140 | 3 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT4G37420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G37420 | 1 | ||
| Tree-based ortholog | 1-to-many | AT1G27200 AT3G27330 AT5G40720 | 3 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G65710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G65710 | 1 | ||
| Tree-based ortholog | 1-to-many | BV6G03970 BV0G65710 | 2 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR01G01420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G01420 | 1 | ||
| Tree-based ortholog | 1-to-many | BR09G30480 BR08G23640 BR06G32960 ... | 5 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G02680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G02680 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_001G22830 CRU_005G05220 CRU_007G33450 | 3 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01097G00030 | 1 | |
| Tree-based ortholog | 1-to-many | CP00005G03100 CP01097G00030 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G00320 | 1 | |
| Tree-based ortholog | 1-to-1 | CR05G01020 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G09150 | 1 | |
| Anchor point | 1-to-1 | CL08G09150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G09150 | 1 | ||
| Tree-based ortholog | 1-to-many | CL05G25820 CL11G00570 | 2 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00002G06710 | 1 | |
| Anchor point | 1-to-1 | CS00002G06710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G06710 | 1 | ||
| Tree-based ortholog | 1-to-many | CS00003G03330 CS00169G00090 | 2 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00096G00350 | 1 | |
| Anchor point | 1-to-1 | CM00096G00350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00096G00350 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00016G03570 CM00008G01680 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G30380 | 1 | |
| Anchor point | 1-to-1 | EG0006G30380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G30380 | 1 | ||
| Tree-based ortholog | 1-to-many | EG0002G28010 EG0009G14170 | 2 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G36420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G36420 | 1 | ||
| Tree-based ortholog | 1-to-many | FV4G22640 FV0G40680 FV0G40690 | 3 | ||
| Glycine max | Orthologous gene family | many-to-1 | GM06G01990 | 1 | |
| Anchor point | 1-to-1 | GM06G01990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G01990 | 1 | ||
| Tree-based ortholog | 1-to-many | GM18G17190 GM08G40440 GM02G03040 ... | 5 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR02G11550 | 1 | |
| Anchor point | 1-to-1 | GR02G11550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G11550 | 1 | ||
| Tree-based ortholog | 1-to-many | GR09G34580 GR06G03760 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G043760 | 1 | |
| Anchor point | 1-to-1 | LJ1G043760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G043760 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G043760 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G080990 MD06G001020 | 2 | |
| Anchor point | 1-to-1 | MD06G001020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G080990 MD06G001020 | 2 | ||
| Tree-based ortholog | 1-to-many | MD00G254720 MD00G098850 MD13G005750 ... | 5 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02943G01080 ME09260G00070 | 2 | |
| Anchor point | 1-to-1 | ME02943G01080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME09260G00070 ME02943G01080 | 2 | ||
| Tree-based ortholog | 1-to-many | ME11495G01000 ME04209G00320 ME03245G00140 ... | 4 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT3G115540 | 1 | |
| Anchor point | 1-to-1 | MT3G115540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G115540 | 1 | ||
| Tree-based ortholog | 1-to-many | MT5G037020 MT2G028920 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G51210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G51210 | 1 | ||
| Tree-based ortholog | 1-to-many | OS08G02850 OS06G51210 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00145G00940 PP00115G00100 PP00160G00690 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00145G00940 PP00333G00160 PP00115G00100 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT05G25210 | 1 | |
| Anchor point | 1-to-1 | PT05G25210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT05G25210 | 1 | ||
| Tree-based ortholog | 1-to-many | PT08G19200 PT10G03900 PT01G33680 | 3 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G01090 | 1 | |
| Anchor point | 1-to-1 | PPE_005G01090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G01090 | 1 | ||
| Tree-based ortholog | 1-to-many | PPE_001G27390 PPE_003G27620 | 2 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30170G06910 | 1 | |
| Anchor point | 1-to-1 | RC30170G06910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G06910 | 1 | ||
| Tree-based ortholog | 1-to-many | RC29736G00880 RC29633G00090 | 2 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G035980 ST12G027950 ST12G027970 ... | 4 | |
| Anchor point | 1-to-many | ST12G027950 ST04G035980 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G035980 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST04G035980 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP7G35080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G35080 | 1 | ||
| Tree-based ortholog | 1-to-many | TP1G21570 TP2G16520 | 2 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G05890 | 1 | |
| Anchor point | 1-to-1 | TC0008G05890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G05890 | 1 | ||
| Tree-based ortholog | 1-to-many | TC0002G23770 TC0004G02470 | 2 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV18G12350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G12350 | 1 | ||
| Tree-based ortholog | 1-to-many | VV01G13170 VV14G01360 | 2 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM06G09780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G09780 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM04G08340 ZM06G09780 | 2 |