Integrative Orthology Viewer: SL03G120280 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL03G120280 SL06G066740 | 2 | |
Anchor point | SL06G066740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SL03G120280 | 1 | ||
Tree-based ortholog | SL03G120280 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00078G02030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00078G02030 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00078G02030 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G47360 AL3G16970 | 2 | |
Anchor point | 1-to-1 | AL1G47360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G16970 | 1 | ||
Tree-based ortholog | 1-to-many | AL1G47360 AL3G16970 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G52380 AT3G15970 | 2 | |
Anchor point | 1-to-1 | AT3G15970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G52380 | 1 | ||
Tree-based ortholog | 1-to-many | AT1G52380 AT3G15970 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV9G16430 | 1 | |
Anchor point | 1-to-1 | BV9G16430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G16430 | 1 | ||
Tree-based ortholog | 1-to-1 | BV9G16430 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR05G17300 BR06G01830 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G01830 | 1 | ||
Tree-based ortholog | 1-to-many | BR05G17300 BR06G01830 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G39450 | 1 | |
Anchor point | 1-to-1 | CRU_003G14940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G39450 | 1 | ||
Tree-based ortholog | 1-to-many | CRU_001G39450 CRU_003G14940 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP31444G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP31444G00010 | 1 | ||
Tree-based ortholog | 1-to-1 | CP31444G00010 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR15G01560 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL09G01910 | 1 | |
Anchor point | 1-to-1 | CL09G01910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G01910 | 1 | ||
Tree-based ortholog | 1-to-1 | CL09G01910 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00258G00180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00258G00180 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00258G00180 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00067G00030 | 1 | |
Anchor point | 1-to-1 | CM00067G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00067G00030 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00067G00030 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G24650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G24650 | 1 | ||
Tree-based ortholog | 1-to-1 | EG0006G24650 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV6G16550 | 1 | |
Anchor point | 1-to-1 | FV6G16550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G16550 | 1 | ||
Tree-based ortholog | 1-to-1 | FV6G16550 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM13G43700 GM15G01660 | 2 | |
Anchor point | 1-to-many | GM15G01660 GM13G43700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G01660 GM13G43700 | 2 | ||
Tree-based ortholog | 1-to-many | GM13G43700 GM15G01660 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR02G05870 | 1 | |
Anchor point | 1-to-1 | GR02G05870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G05870 | 1 | ||
Tree-based ortholog | 1-to-1 | GR02G05870 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G001410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G001410 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ3G001410 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD01G007100 MD17G015650 | 2 | |
Anchor point | 1-to-1 | MD17G015650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD01G007100 MD17G015650 | 2 | ||
Tree-based ortholog | 1-to-many | MD17G015650 MD01G007100 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02196G00190 ME02581G00060 | 2 | |
Anchor point | 1-to-many | ME02196G00190 ME02581G00060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME02196G00190 ME02581G00060 | 2 | ||
Tree-based ortholog | 1-to-many | ME02581G00060 ME02196G00190 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G011930 | 1 | |
Anchor point | 1-to-1 | MT4G011930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G011930 | 1 | ||
Tree-based ortholog | 1-to-1 | MT4G011930 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS05G28190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G28190 | 1 | ||
Tree-based ortholog | 1-to-1 | OS05G28190 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G02200 | 1 | |
Tree-based ortholog | 1-to-1 | OL20G02200 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00001G03770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00001G03770 | 1 | ||
Tree-based ortholog | 1-to-1 | PP00001G03770 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G17910 PT03G05640 | 2 | |
Anchor point | 1-to-many | PT03G05640 PT01G17910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G05640 PT01G17910 | 2 | ||
Tree-based ortholog | 1-to-many | PT01G17910 PT03G05640 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_003G05850 | 1 | |
Anchor point | 1-to-1 | PPE_003G05850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G05850 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_003G05850 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29872G00160 | 1 | |
Anchor point | 1-to-1 | RC29872G00160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29872G00160 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29872G00160 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G036770 ST06G023230 | 2 | |
Anchor point | 1-to-many | ST03G036770 ST06G023230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G036770 | 1 | ||
Tree-based ortholog | 1-to-1 | ST03G036770 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G38990 TP3G14320 | 2 | |
Anchor point | 1-to-1 | TP1G38990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G38990 | 1 | ||
Tree-based ortholog | 1-to-many | TP1G38990 TP3G14320 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G08570 | 1 | |
Anchor point | 1-to-1 | TC0006G08570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G08570 | 1 | ||
Tree-based ortholog | 1-to-1 | TC0006G08570 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV09G05400 | 1 | |
Anchor point | 1-to-1 | VV09G05400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV09G05400 | 1 | ||
Tree-based ortholog | 1-to-1 | VV09G05400 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G34030 ZM08G26080 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G34030 ZM08G26080 | 2 | ||
Tree-based ortholog | 1-to-many | ZM03G34030 ZM08G26080 | 2 |