Integrative Orthology Viewer: SL03G119040 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL03G119040 SL06G069010 SL12G040510 | 3 | |
Anchor point | SL06G069010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SL03G119040 | 1 | ||
Tree-based ortholog | SL12G040510 SL06G069010 SL03G119040 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00105G00240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00105G00240 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00105G00240 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G42310 AL3G19570 | 2 | |
Anchor point | 1-to-1 | AL3G19570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G42310 | 1 | ||
Tree-based ortholog | many-to-many | AL1G42310 AL3G19570 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G18080 AT1G48630 AT3G18130 | 3 | |
Anchor point | 1-to-many | AT1G18080 AT1G48630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G18080 | 1 | ||
Tree-based ortholog | many-to-many | AT1G18080 AT1G48630 AT3G18130 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G21160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G21160 | 1 | ||
Tree-based ortholog | many-to-1 | BV5G21160 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G31500 BR05G18650 BR05G25580 ... | 7 | |
Anchor point | 1-to-many | BR01G31500 BR09G46310 BR06G12850 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G46310 BR06G12850 | 2 | ||
Tree-based ortholog | many-to-many | BR06G12850 BR09G46310 BR08G26180 ... | 8 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G16980 CRU_001G35810 CRU_003G17070 | 3 | |
Anchor point | 1-to-many | CRU_003G17070 CRU_001G35810 CRU_001G16980 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G35810 | 1 | ||
Tree-based ortholog | many-to-many | CRU_001G16980 CRU_001G35810 CRU_003G17070 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00003G04250 | 1 | |
Anchor point | 1-to-1 | CP00003G04250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G04250 | 1 | ||
Tree-based ortholog | many-to-1 | CP00003G04250 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G07800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G07800 | 1 | ||
Tree-based ortholog | many-to-1 | CR06G07800 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G15020 | 1 | |
Anchor point | 1-to-1 | CL06G15020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G15020 | 1 | ||
Tree-based ortholog | many-to-1 | CL06G15020 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00044G00240 | 1 | |
Anchor point | 1-to-1 | CS00044G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00044G00240 | 1 | ||
Tree-based ortholog | many-to-1 | CS00044G00240 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00030G02690 | 1 | |
Anchor point | 1-to-1 | CM00030G02690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00030G02690 | 1 | ||
Tree-based ortholog | many-to-1 | CM00030G02690 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G07120 EG0011G18760 | 2 | |
Anchor point | 1-to-many | EG0011G18760 EG0002G07120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0011G18760 EG0002G07120 | 2 | ||
Tree-based ortholog | many-to-many | EG0011G18760 EG0002G07120 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G16990 | 1 | |
Anchor point | 1-to-1 | FV5G16990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G16990 | 1 | ||
Tree-based ortholog | many-to-many | FV5G16990 FV5G29290 FV3G38910 ... | 4 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G34070 GM08G05610 | 2 | |
Anchor point | 1-to-many | GM05G34070 GM08G05610 GM07G11340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G34070 GM08G05610 | 2 | ||
Tree-based ortholog | many-to-many | GM05G34070 GM08G05610 GM07G11340 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G06980 GR06G19260 GR08G28880 | 3 | |
Anchor point | 1-to-1 | GR06G19260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G28880 GR06G19260 | 2 | ||
Tree-based ortholog | many-to-many | GR06G19260 GR01G06980 GR08G28880 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G050990 | 1 | |
Anchor point | 1-to-1 | LJ4G050990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G050990 | 1 | ||
Tree-based ortholog | many-to-many | LJ4G050990 LJ1G073150 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G337370 MD06G018870 MD14G021690 | 3 | |
Anchor point | 1-to-many | MD06G018870 MD14G021690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G337370 MD06G018870 MD14G021690 | 3 | ||
Tree-based ortholog | many-to-many | MD14G021690 MD00G337370 MD06G018870 ... | 4 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06631G00240 ME12414G00050 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME12414G00050 ME06631G00240 | 2 | ||
Tree-based ortholog | many-to-many | ME12414G00050 ME06631G00240 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT8G106790 | 1 | |
Anchor point | 1-to-1 | MT8G106790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G106790 | 1 | ||
Tree-based ortholog | many-to-1 | MT8G106790 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G49290 OS05G47890 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G49290 | 1 | ||
Tree-based ortholog | many-to-many | OS01G49290 OS05G47890 | 2 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL13G01430 OL21G01550 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL21G01550 OL13G01430 | 2 | ||
Tree-based ortholog | many-to-many | OL21G01550 OL13G01430 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00015G01100 PP00259G00360 PP00276G00010 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00276G00010 PP00015G01100 PP00259G00360 | 3 | ||
Tree-based ortholog | many-to-many | PP00259G00360 PP00015G01100 PP00276G00010 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT12G04960 PT12G05270 PT15G04160 | 3 | |
Anchor point | 1-to-many | PT15G04160 PT12G04960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G05270 PT12G04960 PT15G04160 | 3 | ||
Tree-based ortholog | many-to-many | PT12G04960 PT12G05270 PT15G04160 | 3 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G23120 | 1 | |
Anchor point | 1-to-1 | PPE_005G23120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G23120 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_005G23120 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29654G00070 | 1 | |
Anchor point | 1-to-1 | RC29654G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29654G00070 | 1 | ||
Tree-based ortholog | many-to-1 | RC29654G00070 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G032510 ST06G025890 ST12G018630 | 3 | |
Anchor point | 1-to-many | ST12G018630 ST03G032510 ST06G025890 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G032510 | 1 | ||
Tree-based ortholog | many-to-many | ST12G018630 ST06G025890 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G16100 TP1G35600 TP3G16240 | 3 | |
Anchor point | 1-to-many | TP1G35600 TP3G16240 TP1G16100 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G16100 | 1 | ||
Tree-based ortholog | many-to-many | TP1G16100 TP1G35600 TP3G16240 | 3 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G04720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G04720 | 1 | ||
Tree-based ortholog | many-to-1 | TC0003G04720 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV17G06860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G06860 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G30440 ZM08G09920 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM08G09920 ZM06G30440 | 2 | ||
Tree-based ortholog | many-to-many | ZM08G09920 ZM06G30440 | 2 |