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Integrative Orthology Viewer:
SL03G079880
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL03G079880 SL05G041140 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL03G079880 | 1 | ||
| Tree-based ortholog | SL03G079880 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00165G00290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00165G00290 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00165G00290 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G24020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G24020 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL5G24020 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G53980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G53980 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT3G53980 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV2G06080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G06080 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV2G06080 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR04G05040 | 1 | |
| Anchor point | N/A | BR10G24200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G05040 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR04G05040 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G19350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G19350 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_005G19350 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00017G01430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00017G01430 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00017G01430 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G06730 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G06730 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00021G01590 CS00083G00250 CS00083G00260 | 3 | |
| Anchor point | N/A | CS00021G01590 CS00083G00240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G01590 | 1 | ||
| Tree-based ortholog | 1-to-many | CS00083G00240 CS00083G00250 CS00083G00260 | 3 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00008G01960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00008G01960 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00008G01960 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G23790 EG0007G23810 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0007G23790 EG0007G23810 | 2 | ||
| Tree-based ortholog | 1-to-1 | EG0011G25580 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV6G11930 FV7G28450 | 2 | |
| Anchor point | N/A | FV7G28450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G28450 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV6G11930 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G16620 GM07G16770 GM18G41320 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G16770 GM18G41320 | 2 | ||
| Tree-based ortholog | 1-to-many | GM01G25980 GM03G16620 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR06G17820 GR07G37740 GR12G07360 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G37740 | 1 | ||
| Tree-based ortholog | 1-to-many | GR06G17820 GR07G37740 | 2 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G392600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G392600 | 1 | ||
| Tree-based ortholog | 1-to-1 | MD00G392600 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME06549G00020 ME08265G02650 | 2 | |
| Anchor point | N/A | ME08265G02650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06549G00020 | 1 | ||
| Tree-based ortholog | 1-to-many | ME08425G00020 ME06549G00020 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT7G065160 MT7G065210 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G065160 MT7G065210 | 2 | ||
| Tree-based ortholog | 1-to-many | MT7G065210 MT7G065160 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G62980 OS04G33920 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G33920 | 1 | ||
| Tree-based ortholog | 1-to-many | OS05G06780 OS04G33920 OS04G33930 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00039G01220 PP00232G00020 PP00232G00010 ... | 4 | |
| Populus trichocarpa | Orthologous gene family | many-to-many | PT08G06180 PT10G19630 PT16G10430 | 3 | |
| Anchor point | N/A | PT08G06180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G19630 PT08G06180 | 2 | ||
| Tree-based ortholog | 1-to-many | PT16G10430 PT06G09250 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_002G23340 PPE_006G27200 | 2 | |
| Anchor point | N/A | PPE_002G23330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G27200 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_006G27200 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30143G00570 | 1 | |
| Anchor point | N/A | RC30143G00570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30143G00570 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30143G00570 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G019630 ST06G016490 | 2 | |
| Anchor point | N/A | ST03G019630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G019630 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST06G016490 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G08420 | 1 | |
| Anchor point | N/A | TP6G36940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08420 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP5G08420 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0005G02740 TC0010G02910 | 2 | |
| Anchor point | N/A | TC0010G02900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G02740 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0005G02740 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV08G13720 VV13G04390 | 2 | |
| Anchor point | N/A | VV13G04390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G04390 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV08G13720 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM03G26910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G26910 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM02G22780 ZM01G09210 ZM02G15810 | 3 |