Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL02G065280
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL02G065280 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL02G065280 SL03G070380 | 2 | ||
| Tree-based ortholog | SL02G065260 SL03G070380 SL02G065280 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00153G00240 ATR_00077G01230 ATR_00077G01210 ... | 5 | |
| Tree-based ortholog | many-to-1 | ATR_00077G01220 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G03380 | 1 | |
| Tree-based ortholog | many-to-1 | AL6G10010 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G23620 | 1 | |
| Tree-based ortholog | many-to-1 | AT5G10300 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV6G09340 BV6G02650 | 2 | |
| Tree-based ortholog | many-to-many | BV0G43820 BV6G09340 BV6G02650 | 3 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G13370 | 1 | |
| Tree-based ortholog | many-to-1 | BR10G23090 | 1 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G02760 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_006G08560 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP01245G00010 CP00076G00270 CP00202G00170 | 3 | |
| Tree-based ortholog | many-to-1 | CP03887G00010 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G16850 | 1 | |
| Tree-based ortholog | many-to-many | CL01G16860 CL01G16850 CL01G16840 | 3 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CS00259G00140 CS00006G02560 | 2 | |
| Tree-based ortholog | many-to-many | CS00259G00150 CS00259G00140 CS00006G02560 | 3 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00007G05590 | 1 | |
| Tree-based ortholog | many-to-many | CM00007G05600 CM00007G05590 CM00007G05580 | 3 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0009G07840 EG0009G07770 EG0009G07720 ... | 9 | |
| Tree-based ortholog | many-to-many | EG0009G07840 EG0009G07830 EG0009G07800 ... | 10 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G37080 | 1 | |
| Tree-based ortholog | many-to-1 | FV5G37130 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM02G07030 GM16G26050 GM02G06990 ... | 8 | |
| Tree-based ortholog | many-to-many | GM11G06330 GM02G07030 GM02G07000 ... | 12 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G20950 | 1 | |
| Tree-based ortholog | many-to-1 | GR07G20950 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ4G016460 LJ4G016440 | 2 | |
| Tree-based ortholog | many-to-many | LJ4G016460 LJ4G016440 | 2 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G109200 | 1 | |
| Tree-based ortholog | many-to-many | MD00G392420 MD00G221400 MD15G020430 ... | 4 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME03235G00260 ME12587G00030 | 2 | |
| Tree-based ortholog | many-to-many | ME12587G00030 ME03235G00260 ME00085G00010 ... | 12 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G079120 | 1 | |
| Tree-based ortholog | many-to-many | MT5G018350 MT5G018365 MT8G079120 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G57770 | 1 | |
| Tree-based ortholog | many-to-many | OS01G25360 OS01G37630 OS01G37650 ... | 11 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00069G01220 PP00065G00120 PP00295G00150 | 3 | |
| Tree-based ortholog | many-to-many | PP00295G00150 PP00069G01220 PP00065G00120 | 3 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT07G03770 PT07G03730 | 2 | |
| Tree-based ortholog | many-to-many | PT07G03710 PT07G03700 PT07G03720 ... | 13 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G16380 | 1 | |
| Tree-based ortholog | many-to-many | PPE_007G16370 PPE_007G16380 | 2 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29676G00420 | 1 | |
| Tree-based ortholog | many-to-many | RC29676G00440 RC29676G00420 | 2 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G012030 | 1 | |
| Tree-based ortholog | many-to-many | ST09G016640 ST06G025780 ST02G012050 | 3 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G02540 | 1 | |
| Tree-based ortholog | many-to-1 | TP6G33130 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G04680 | 1 | |
| Tree-based ortholog | many-to-many | TC0001G04660 TC0001G04670 TC0001G04650 ... | 5 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G11710 | 1 | |
| Tree-based ortholog | many-to-1 | VV00G11710 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G33680 ZM03G29910 | 2 | |
| Tree-based ortholog | many-to-many | ZM08G09310 ZM10G14550 ZM08G33680 ... | 8 |