Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
RC29747G00240
(Ricinus communis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Ricinus communis | Orthologous gene family | RC29660G00290 RC29747G00240 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | RC29747G00240 | 1 | ||
| Tree-based ortholog | RC29747G00240 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00015G00310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00015G00310 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00015G00310 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G19690 | 1 | |
| Anchor point | N/A | AL3G19690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G19690 | 1 | ||
| Tree-based ortholog | 1-to-many | AL3G19690 AL1G42390 AL1G42440 ... | 9 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G18210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G18210 | 1 | ||
| Tree-based ortholog | 1-to-many | AT3G18210 AT1G48700 AT5G43660 ... | 4 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G79980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G79980 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV0G79980 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G35450 BR05G25470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G35450 | 1 | ||
| Tree-based ortholog | 1-to-many | BR05G25470 BR03G35450 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G17170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G17170 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_003G17170 CRU_001G35900 CRU_001G35910 ... | 4 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00065G00820 CP00065G00830 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00065G00830 CP00065G00820 | 2 | ||
| Tree-based ortholog | 1-to-many | CP00065G00830 CP00065G00820 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G05810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G05810 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL01G05810 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00008G00030 CS00044G00020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00044G00020 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00044G00020 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00005G02890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G02890 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00005G02890 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G23370 EG0011G18570 | 2 | |
| Anchor point | N/A | EG0011G18570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G18570 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0011G18570 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G17220 | 1 | |
| Anchor point | N/A | FV5G17220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G17220 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV5G17220 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM07G11180 GM09G31060 GM10G41460 ... | 6 | |
| Anchor point | N/A | GM09G31060 GM20G25770 GM07G11180 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G31060 GM07G11180 | 2 | ||
| Tree-based ortholog | 1-to-many | GM09G31060 GM07G11180 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G11800 GR10G14430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G11800 | 1 | ||
| Tree-based ortholog | 1-to-many | GR10G14430 GR05G11800 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G050840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G050840 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ5G038270 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD16G001010 | 1 | |
| Anchor point | N/A | MD13G002150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD16G001010 | 1 | ||
| Tree-based ortholog | 1-to-1 | MD00G336390 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME03264G00370 | 1 | |
| Anchor point | N/A | ME12711G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03264G00370 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME12711G00120 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G109230 MT6G081860 | 2 | |
| Anchor point | N/A | MT1G109230 MT6G081860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G081860 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT6G081860 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G31770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G31770 | 1 | ||
| Tree-based ortholog | 1-to-many | OS01G31770 OS01G08570 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00044G00840 PP00082G00420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00082G00420 PP00044G00840 | 2 | ||
| Tree-based ortholog | 1-to-many | PP00044G00840 PP00082G00420 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT08G12580 PT12G05120 PT15G04310 | 3 | |
| Anchor point | N/A | PT12G05120 PT15G04310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G04310 PT12G05120 | 2 | ||
| Tree-based ortholog | 1-to-many | PT15G04310 PT12G05120 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G32880 PPE_005G22880 | 2 | |
| Anchor point | N/A | PPE_005G22880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G22880 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_005G22880 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G008610 | 1 | |
| Anchor point | N/A | SL05G008610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G008610 | 1 | ||
| Tree-based ortholog | 1-to-many | SL05G008610 SL04G080880 SL04G080890 | 3 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G034280 ST05G009120 | 2 | |
| Anchor point | N/A | ST05G009120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G009120 | 1 | ||
| Tree-based ortholog | 1-to-many | ST05G009120 ST04G034280 | 2 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G20410 TP3G16320 | 2 | |
| Anchor point | N/A | TP3G16320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G16320 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP3G16320 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G00340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G00340 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0006G00340 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G07070 VV17G06530 | 2 | |
| Anchor point | N/A | VV17G06530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G06530 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV17G06530 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM03G12970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G12970 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM03G12970 | 1 |