Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
RC29681G00500
(Ricinus communis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Ricinus communis | Orthologous gene family | RC29681G00500 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | RC29681G00500 | 1 | ||
| Tree-based ortholog | RC29681G00500 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00024G02160 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00029G04340 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AL0G09440 AL4G26730 | 2 | |
| Tree-based ortholog | 1-to-many | AL4G26730 AL0G09440 | 2 | ||
| Arabidopsis thaliana | Anchor point | N/A | AT2G29950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G29950 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT2G29950 | 1 | ||
| Beta vulgaris | Anchor point | N/A | BV2G04350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV2G04350 BV2G04370 | 2 | ||
| Tree-based ortholog | 1-to-many | BV2G04370 BV2G04350 | 2 | ||
| Brassica rapa | Anchor point | N/A | BR03G23160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR05G05800 BR03G20130 BR04G23800 | 3 | ||
| Tree-based ortholog | 1-to-1 | BR03G23160 | 1 | ||
| Capsella rubella | Anchor point | N/A | CRU_004G10730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G10730 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_004G10730 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00415G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00415G00020 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00415G00020 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G04110 | 1 | |
| Tree-based ortholog | 1-to-1 | CL07G04110 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00026G01110 | 1 | |
| Anchor point | N/A | CS00026G01110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00026G01110 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00026G01110 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00075G00650 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00075G00650 | 1 | ||
| Eucalyptus grandis | Anchor point | N/A | EG0010G16500 EG0010G01890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G16500 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0010G16500 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G29440 | 1 | |
| Tree-based ortholog | 1-to-many | FV0G15460 FV1G09930 | 2 | ||
| Glycine max | Anchor point | N/A | GM18G03130 GM14G37280 GM11G35270 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G03130 GM11G35270 | 2 | ||
| Tree-based ortholog | 1-to-1 | GM14G37280 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR09G09210 | 1 | |
| Anchor point | N/A | GR09G09210 GR11G28770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G09210 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR09G09210 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G036450 | 1 | |
| Tree-based ortholog | 1-to-many | LJ6G016460 LJ4G036450 | 2 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD01G014680 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G329430 MD15G015530 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME03150G00200 | 1 | |
| Anchor point | N/A | ME03150G00200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03150G00200 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME03150G00200 | 1 | ||
| Medicago truncatula | Anchor point | N/A | MT3G070490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G070490 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT3G070490 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G40610 | 1 | |
| Tree-based ortholog | 1-to-many | OS03G29680 OS08G27870 OS08G27860 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00180G00160 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00180G00160 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT01G25160 PT09G04640 | 2 | |
| Anchor point | N/A | PT08G06820 PT01G25160 PT09G04640 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G04640 | 1 | ||
| Tree-based ortholog | 1-to-many | PT01G25160 PT09G04640 | 2 | ||
| Prunus persica | Anchor point | N/A | PPE_002G24000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G24000 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_002G24000 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL06G076960 | 1 | |
| Anchor point | N/A | SL06G076960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G076960 | 1 | ||
| Tree-based ortholog | 1-to-many | SL11G028200 SL06G076960 | 2 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST06G032740 | 1 | |
| Anchor point | N/A | ST06G032740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G032740 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST06G032740 | 1 | ||
| Thellungiella parvula | Anchor point | N/A | TP4G12510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G12510 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP4G12510 | 1 | ||
| Theobroma cacao | Anchor point | N/A | TC0009G29660 TC0010G01630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G01630 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0010G01630 | 1 | ||
| Vitis vinifera | Anchor point | N/A | VV13G10470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G10470 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV13G10470 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G01870 | 1 | |
| Tree-based ortholog | 1-to-many | ZM01G17900 ZM09G19520 ZM07G13290 ... | 4 |