Integrative Orthology Viewer: PT17G03710 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT17G03710 | 1 | |
Anchor point | PT07G12260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT17G03710 PT07G12270 | 2 | ||
Tree-based ortholog | PT07G12270 PT07G12260 PT11G13470 ... | 4 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00010G05230 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00010G05230 | 1 | ||
Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G14860 | 1 | |
Tree-based ortholog | many-to-many | AL1G49550 AL7G14860 AL8G20070 ... | 4 | ||
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G54290 | 1 | |
Tree-based ortholog | many-to-many | AT1G54290 AT5G54760 AT4G27130 ... | 4 | ||
Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G70330 | 1 | |
Tree-based ortholog | many-to-1 | BV0G70330 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR01G17430 | 1 | |
Tree-based ortholog | many-to-many | BR08G01850 BR08G00830 BR01G17430 ... | 10 | ||
Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G41470 | 1 | |
Tree-based ortholog | many-to-many | CRU_001G41470 CRU_008G14660 CRU_007G12920 ... | 4 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00097G00540 | 1 | |
Tree-based ortholog | many-to-many | CP00097G00540 CP00012G03070 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G12800 | 1 | |
Tree-based ortholog | many-to-1 | CR06G12800 | 1 | ||
Citrullus lanatus | Anchor point | 1-to-1 | CL02G00310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G00320 | 1 | ||
Tree-based ortholog | many-to-1 | CL02G00320 | 1 | ||
Citrus sinensis | Anchor point | 1-to-1 | CS00064G00080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00064G00080 | 1 | ||
Tree-based ortholog | many-to-many | CS00152G00220 CS00064G00080 | 2 | ||
Cucumis melo | Anchor point | 1-to-1 | CM00034G04390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00034G04390 | 1 | ||
Tree-based ortholog | many-to-1 | CM00034G04390 | 1 | ||
Eucalyptus grandis | Anchor point | 1-to-1 | EG0011G06790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0006G29120 | 1 | ||
Tree-based ortholog | many-to-many | EG0011G06790 EG0006G29120 EG0006G06680 ... | 4 | ||
Fragaria vesca | Anchor point | 1-to-1 | FV1G16210 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G16210 | 1 | ||
Tree-based ortholog | many-to-1 | FV1G16210 | 1 | ||
Glycine max | Anchor point | 1-to-1 | GM12G10810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM06G45930 GM12G10810 | 2 | ||
Tree-based ortholog | many-to-many | GM06G45930 GM12G10810 | 2 | ||
Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR02G08360 GR07G31420 GR13G16340 ... | 4 | |
Tree-based ortholog | many-to-many | GR13G16340 GR07G31420 GR09G42640 ... | 9 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G015590 | 1 | |
Tree-based ortholog | many-to-many | LJ2G047830 LJ6G009170 LJ3G015590 | 3 | ||
Malus domestica | Anchor point | 1-to-1 | MD17G008180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD03G017860 | 1 | ||
Tree-based ortholog | many-to-1 | MD17G008180 | 1 | ||
Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME05206G00220 | 1 | |
Tree-based ortholog | many-to-many | ME03241G00740 ME05206G00220 ME12753G00200 ... | 5 | ||
Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G046733 | 1 | |
Tree-based ortholog | many-to-1 | MT4G046733 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G41900 | 1 | |
Tree-based ortholog | many-to-many | OS07G34589 OS05G41900 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL16G01920 | 1 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00004G00570 PP00023G00950 PP00310G00040 | 3 | |
Tree-based ortholog | many-to-many | PP00023G00950 PP00310G00040 PP00004G00570 | 3 | ||
Prunus persica | Anchor point | 1-to-1 | PPE_003G19900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_004G19630 PPE_003G22230 | 2 | ||
Tree-based ortholog | many-to-1 | PPE_003G19900 | 1 | ||
Ricinus communis | Anchor point | 1-to-1 | RC29842G01400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28166G00460 | 1 | ||
Tree-based ortholog | many-to-many | RC28166G00460 RC27777G00100 | 2 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL07G064150 SL10G006470 | 2 | |
Tree-based ortholog | many-to-many | SL10G006470 SL07G064150 | 2 | ||
Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G005090 | 1 | |
Tree-based ortholog | many-to-many | ST12G012690 ST06G015330 ST10G005090 | 3 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G25100 | 1 | |
Tree-based ortholog | many-to-many | TP7G25100 TP6G16900 TP5G17640 | 3 | ||
Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0007G04940 | 1 | |
Tree-based ortholog | many-to-many | TC0007G04890 TC0007G04940 TC0007G03440 | 3 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV12G12280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G12280 | 1 | ||
Tree-based ortholog | many-to-1 | VV19G00470 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G27580 | 1 | |
Tree-based ortholog | many-to-many | ZM07G23330 ZM03G29690 ZM06G27580 | 3 |