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Integrative Orthology Viewer:
PT17G02880
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT07G12980 PT17G02880 | 2 |  |
| Anchor point | PT07G12980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT17G02880 PT07G12980 | 2 | ||
| Tree-based ortholog | PT07G12980 PT17G02880 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00010G00110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00010G00110 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00010G00110 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G25760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G25760 | 1 | ||
| Tree-based ortholog | many-to-1 | AL7G25760 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G17300 AT5G56680 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G17300 | 1 | ||
| Tree-based ortholog | many-to-1 | AT4G17300 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV9G09750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G09750 | 1 | ||
| Tree-based ortholog | many-to-1 | BV9G09750 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR08G10870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR08G10870 | 1 | ||
| Tree-based ortholog | many-to-many | BR08G10870 BR01G18750 | 2 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G23030 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_007G23030 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00029G01560 | 1 | |
| Tree-based ortholog | many-to-1 | CP00029G01560 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G11350 | 1 | |
| Tree-based ortholog | many-to-1 | CR03G11350 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G02600 | 1 | |
| Tree-based ortholog | many-to-1 | CL10G02600 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00053G00480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00053G00480 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00053G00480 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00021G02560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00021G02560 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00021G02560 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G16980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0004G16980 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0004G16980 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV1G25230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G25230 | 1 | ||
| Tree-based ortholog | many-to-1 | FV1G25230 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM05G04660 GM17G15090 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM05G04660 GM17G15090 | 2 | ||
| Tree-based ortholog | many-to-many | GM05G04660 GM17G15090 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G21360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G21360 | 1 | ||
| Tree-based ortholog | many-to-1 | GR06G21360 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G022300 | 1 | |
| Tree-based ortholog | many-to-1 | LJ4G022300 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD06G005800 MD00G423530 | 2 | |
| Tree-based ortholog | many-to-many | MD00G423530 MD06G005800 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME11581G00500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME11581G00500 | 1 | ||
| Tree-based ortholog | many-to-1 | ME11581G00500 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT4G100920 MT8G102050 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G100920 | 1 | ||
| Tree-based ortholog | many-to-1 | MT4G100920 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G30200 | 1 | |
| Anchor point | 1-to-1 | OS07G30200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G30200 | 1 | ||
| Tree-based ortholog | many-to-1 | OS07G30200 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL13G01500 OL21G01480 | 2 | |
| Tree-based ortholog | many-to-many | OL21G01480 OL13G01500 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00028G01280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00028G01280 | 1 | ||
| Tree-based ortholog | many-to-1 | PP00028G01280 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_007G08190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G07680 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_005G07680 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29912G01160 | 1 | |
| Tree-based ortholog | many-to-many | RC28708G00050 RC29912G01160 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G019940 | 1 | |
| Tree-based ortholog | many-to-1 | SL03G019940 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G024600 | 1 | |
| Tree-based ortholog | many-to-1 | ST03G024600 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP7G16870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G16870 | 1 | ||
| Tree-based ortholog | many-to-1 | TP7G16870 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G24790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G24790 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0003G24790 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV16G01380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G10480 | 1 | ||
| Tree-based ortholog | many-to-1 | VV00G10480 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G21960 | 1 | |
| Tree-based ortholog | many-to-1 | ZM07G21960 | 1 |