Integrative Orthology Viewer: PT16G09410 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT16G09410 PTCG00560 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | PT16G09410 PTCG00560 | 2 | ||
Tree-based ortholog | PT00G16070 PT16G09410 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_CG00530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_CG00530 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_CG00530 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL2G10070 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G10070 | 1 | ||
Tree-based ortholog | many-to-many | AL2G10810 AL2G10070 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | ATCG00530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATCG00530 | 1 | ||
Tree-based ortholog | many-to-1 | ATCG00530 | 1 | ||
Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G80050 | 1 | |
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR01G06530 | 1 | |
Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G08990 | 1 | |
Carica papaya | Orthologous gene family | many-to-1 | CPCG00540 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CPCG00540 | 1 | ||
Tree-based ortholog | many-to-1 | CPCG00540 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CRCG00760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G02700 | 1 | ||
Tree-based ortholog | many-to-1 | CRCG00760 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CSCG00570 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CSCG00570 | 1 | ||
Tree-based ortholog | many-to-1 | CSCG00570 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CMCG00530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CMCG00530 | 1 | ||
Tree-based ortholog | many-to-1 | CMCG00530 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0005G09390 EG0005G20060 EGCG00470 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0005G20060 EG0005G09390 EGCG00470 | 3 | ||
Tree-based ortholog | many-to-1 | EG0005G09390 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G54520 FV0G55810 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV0G54520 FV0G55810 | 2 | ||
Glycine max | Orthologous gene family | many-to-1 | GMCG00530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GMCG00530 | 1 | ||
Tree-based ortholog | many-to-many | GM14G12194 GM04G17591 GMCG00530 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GRCG00530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GRCG00530 | 1 | ||
Tree-based ortholog | many-to-many | GR01G10470 GR05G14630 GR02G16010 ... | 4 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ6G027280 LJCG00530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJCG00530 LJ6G027280 | 2 | ||
Tree-based ortholog | many-to-many | LJCG00530 LJ6G027280 | 2 | ||
Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD02G010260 | 1 | |
Manihot esculenta | Orthologous gene family | many-to-many | ME04355G00080 MECG00580 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MECG00580 | 1 | ||
Tree-based ortholog | many-to-1 | MECG00580 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G111320 MT5G019520 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G019520 | 1 | ||
Tree-based ortholog | many-to-1 | MT5G019520 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G24598 OSCG00610 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OSCG00610 OS02G24598 | 2 | ||
Tree-based ortholog | many-to-many | OSCG00610 OS02G24598 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL03G05270 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-1 | PPCG00310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPCG00310 | 1 | ||
Tree-based ortholog | many-to-1 | PPCG00310 | 1 | ||
Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G00200 | 1 | |
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G007370 SLCG00530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL01G007370 SLCG00530 | 2 | ||
Tree-based ortholog | many-to-many | SL01G007370 SLCG00530 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G019050 ST12G008890 STCG00520 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ST01G019050 STCG00520 | 2 | ||
Tree-based ortholog | many-to-many | STCG00520 ST01G019050 ST12G008890 ... | 4 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G28920 | 1 | |
Theobroma cacao | Orthologous gene family | many-to-1 | TCCG00540 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TCCG00540 | 1 | ||
Tree-based ortholog | many-to-1 | TCCG00540 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VVCG00570 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VVCG00570 | 1 | ||
Tree-based ortholog | many-to-many | VV12G12360 VV05G02040 VVCG00570 ... | 4 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G29460 ZMCG00130 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZMCG00130 ZM06G29460 | 2 | ||
Tree-based ortholog | many-to-many | ZM06G29460 ZMCG00130 | 2 |