Integrative Orthology Viewer: PT16G05830 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT06G19360 PT16G05830 | 2 | |
Anchor point | PT06G19360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT16G05830 PT06G19360 | 2 | ||
Tree-based ortholog | PT16G05830 PT06G19360 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00024G01170 | 1 | |
Anchor point | 1-to-1 | ATR_00024G01170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00048G01170 ATR_00024G01170 | 2 | ||
Tree-based ortholog | many-to-many | ATR_00048G01170 ATR_00024G01170 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G28550 | 1 | |
Anchor point | 1-to-1 | AL5G28550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G28550 | 1 | ||
Tree-based ortholog | many-to-many | AL5G28550 AL4G29220 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G58030 | 1 | |
Anchor point | 1-to-1 | AT3G58030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G58030 | 1 | ||
Tree-based ortholog | many-to-many | AT3G58030 AT2G42030 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G15180 | 1 | |
Anchor point | 1-to-1 | BV3G15180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G15180 | 1 | ||
Tree-based ortholog | many-to-1 | BV3G15180 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR04G02460 BR07G15550 BR09G38430 | 3 | |
Anchor point | 1-to-many | BR04G02460 BR03G20980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR07G15550 | 1 | ||
Tree-based ortholog | many-to-many | BR07G15550 BR04G02460 BR09G38430 ... | 5 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G23500 | 1 | |
Anchor point | 1-to-many | CRU_004G23510 CRU_005G23500 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G23500 | 1 | ||
Tree-based ortholog | many-to-many | CRU_005G23500 CRU_004G23510 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00085G00560 | 1 | |
Anchor point | 1-to-1 | CP00085G00560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00085G00560 | 1 | ||
Tree-based ortholog | many-to-1 | CP00085G00560 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR17G09640 | 1 | |
Tree-based ortholog | many-to-1 | CR17G09640 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G15650 | 1 | |
Anchor point | 1-to-1 | CL10G15650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G15650 | 1 | ||
Tree-based ortholog | many-to-1 | CL10G15650 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00018G02090 | 1 | |
Anchor point | 1-to-1 | CS00018G02090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00018G02090 | 1 | ||
Tree-based ortholog | many-to-1 | CS00018G02090 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00011G05510 | 1 | |
Anchor point | 1-to-1 | CM00011G05510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00011G05510 | 1 | ||
Tree-based ortholog | many-to-1 | CM00011G05510 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G20730 | 1 | |
Anchor point | 1-to-many | EG0001G20730 EG0011G15190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0001G20730 | 1 | ||
Tree-based ortholog | many-to-many | EG0011G15190 EG0001G20730 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G50170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G50170 | 1 | ||
Tree-based ortholog | many-to-1 | FV0G50170 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G30190 GM19G33090 | 2 | |
Anchor point | 1-to-many | GM19G33090 GM03G30190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM03G30190 GM19G33090 | 2 | ||
Tree-based ortholog | many-to-many | GM03G30190 GM19G33090 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G14350 GR07G36240 | 2 | |
Anchor point | 1-to-many | GR02G15590 GR06G14350 GR07G36240 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G36240 | 1 | ||
Tree-based ortholog | many-to-many | GR07G36240 GR02G15590 GR06G14350 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G059860 LJ1G059900 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ1G059860 LJ1G059900 | 2 | ||
Tree-based ortholog | many-to-many | LJ1G059860 LJ1G059900 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G050540 MD12G005110 | 2 | |
Anchor point | 1-to-1 | MD12G005110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G050540 MD12G005110 | 2 | ||
Tree-based ortholog | many-to-many | MD00G050540 MD12G005110 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00823G00080 ME06591G00280 | 2 | |
Anchor point | 1-to-many | ME00823G00080 ME06591G00280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME06591G00280 ME00823G00080 | 2 | ||
Tree-based ortholog | many-to-many | ME00823G00080 ME06591G00280 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G093390 | 1 | |
Anchor point | 1-to-many | MT1G054210 MT7G093390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G093390 | 1 | ||
Tree-based ortholog | many-to-1 | MT7G093390 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G61420 | 1 | |
Tree-based ortholog | many-to-many | OS05G39380 OS01G61420 OS08G06510 | 3 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL11G02190 | 1 | |
Tree-based ortholog | many-to-1 | OL11G02190 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00227G00380 PP00288G00210 PP00181G00150 | 3 | |
Tree-based ortholog | many-to-many | PP00227G00380 PP00181G00150 PP00288G00210 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G09280 | 1 | |
Anchor point | 1-to-1 | PPE_007G09280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G09280 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_007G09280 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29613G00220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29613G00220 | 1 | ||
Tree-based ortholog | many-to-1 | RC29613G00220 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL10G078900 | 1 | |
Anchor point | 1-to-1 | SL10G078900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G078900 | 1 | ||
Tree-based ortholog | many-to-1 | SL10G078900 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST10G019970 | 1 | |
Anchor point | 1-to-1 | ST10G019970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G019970 | 1 | ||
Tree-based ortholog | many-to-1 | ST10G019970 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G04690 | 1 | |
Anchor point | 1-to-1 | TP5G04690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G04690 | 1 | ||
Tree-based ortholog | many-to-many | TP5G04690 TP4G24260 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G17550 | 1 | |
Anchor point | 1-to-1 | TC0005G17550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G17550 | 1 | ||
Tree-based ortholog | many-to-1 | TC0005G17550 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G00670 | 1 | |
Tree-based ortholog | many-to-1 | VV13G00670 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G26260 ZM08G18010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G18010 ZM06G26260 | 2 | ||
Tree-based ortholog | many-to-many | ZM06G26260 ZM08G18010 ZM08G32510 ... | 7 |