Integrative Orthology Viewer: PT13G03130 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT05G04480 PT13G03130 | 2 | |
Anchor point | PT05G04480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT05G04480 PT13G03130 | 2 | ||
Tree-based ortholog | PT13G03130 PT05G04480 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Anchor point | 1-to-1 | ATR_00057G01330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00057G01330 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00057G01330 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G51660 | 1 | |
Anchor point | 1-to-many | AL6G28280 AL3G04850 AL1G51620 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G04850 | 1 | ||
Tree-based ortholog | many-to-many | AL6G28280 AL3G04850 AL1G51620 ... | 4 | ||
Arabidopsis thaliana | Anchor point | 1-to-many | AT5G27200 AT1G54580 AT3G05020 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G05020 | 1 | ||
Tree-based ortholog | many-to-many | AT5G27200 AT3G05020 AT1G54580 ... | 4 | ||
Beta vulgaris | Anchor point | 1-to-1 | BV0G73480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G14010 | 1 | ||
Tree-based ortholog | many-to-1 | BV5G14010 | 1 | ||
Brassica rapa | Anchor point | 1-to-many | BR09G05230 BR05G35250 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR00G05930 | 1 | ||
Tree-based ortholog | many-to-many | BR09G05230 BR03G29800 BR05G35250 ... | 5 | ||
Capsella rubella | Anchor point | 1-to-many | CRU_006G24540 CRU_003G04100 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G04100 | 1 | ||
Tree-based ortholog | many-to-many | CRU_006G24540 CRU_003G04100 CRU_002G08560 ... | 4 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00117G00270 | 1 | |
Anchor point | 1-to-many | CP00016G01070 CP00117G00270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00117G00270 | 1 | ||
Tree-based ortholog | many-to-1 | CP00117G00270 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G03530 | 1 | |
Tree-based ortholog | many-to-1 | CR13G03530 | 1 | ||
Citrullus lanatus | Anchor point | 1-to-many | CL02G16520 CL06G05220 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G16520 | 1 | ||
Tree-based ortholog | many-to-1 | CL06G18780 | 1 | ||
Citrus sinensis | Anchor point | 1-to-1 | CS00011G02440 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00011G02440 | 1 | ||
Tree-based ortholog | many-to-1 | CS00011G02440 | 1 | ||
Cucumis melo | Anchor point | 1-to-many | CM00003G04620 CM00047G02420 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00003G04620 | 1 | ||
Tree-based ortholog | many-to-1 | CM00089G00170 | 1 | ||
Eucalyptus grandis | Anchor point | 1-to-1 | EG0002G10360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0008G30080 EG0008G30290 EG0008G28170 ... | 6 | ||
Tree-based ortholog | many-to-many | EG0008G30290 EG0008G30340 EG0008G30190 ... | 6 | ||
Fragaria vesca | Anchor point | 1-to-many | FV4G11640 FV0G24110 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G24110 | 1 | ||
Tree-based ortholog | many-to-1 | FV0G24110 | 1 | ||
Glycine max | Anchor point | 1-to-many | GM10G30000 GM20G37385 GM19G42860 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM10G30000 GM19G42860 | 2 | ||
Tree-based ortholog | many-to-many | GM03G40250 GM19G42860 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR13G11690 | 1 | |
Anchor point | 1-to-1 | GR13G11690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR13G11690 | 1 | ||
Tree-based ortholog | many-to-1 | GR06G25710 | 1 | ||
Lotus japonicus | Anchor point | 1-to-1 | LJ5G024820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G045070 | 1 | ||
Tree-based ortholog | many-to-1 | LJ6G023990 | 1 | ||
Malus domestica | Anchor point | 1-to-many | MD16G012860 MD13G016660 MD12G022970 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD12G023060 MD00G316260 MD00G481800 | 3 | ||
Tree-based ortholog | many-to-many | MD00G481800 MD12G022970 MD12G023060 ... | 4 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03614G04050 ME04285G00240 | 2 | |
Anchor point | 1-to-many | ME09365G00140 ME04285G00240 ME01551G03140 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME04285G00240 ME03614G04050 | 2 | ||
Tree-based ortholog | many-to-many | ME04285G00240 ME03614G04050 | 2 | ||
Medicago truncatula | Anchor point | 1-to-many | MT1G081920 MT4G118750 MT2G020360 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT2G020360 | 1 | ||
Tree-based ortholog | many-to-1 | MT8G099920 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G34890 | 1 | |
Tree-based ortholog | many-to-many | OS12G34890 OS09G36860 OS03G63930 ... | 4 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G01150 | 1 | |
Tree-based ortholog | many-to-1 | OL12G01150 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00468G00020 PP00069G00760 PP00468G00050 | 3 | |
Tree-based ortholog | many-to-many | PP00468G00020 PP00468G00050 PP00069G00760 | 3 | ||
Prunus persica | Anchor point | 1-to-many | PPE_006G33940 PPE_001G13530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G33940 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_006G33940 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30128G00730 | 1 | |
Anchor point | 1-to-many | RC29726G00920 RC30128G00730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30128G00730 | 1 | ||
Tree-based ortholog | many-to-1 | RC30128G00730 | 1 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G054510 | 1 | |
Tree-based ortholog | many-to-many | SL01G067730 SL06G054510 | 2 | ||
Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G021750 | 1 | |
Tree-based ortholog | many-to-many | ST01G021750 ST06G018260 | 2 | ||
Thellungiella parvula | Anchor point | 1-to-many | TP3G03850 TP2G20440 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G03850 | 1 | ||
Tree-based ortholog | many-to-many | TP2G20440 TP3G03850 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G25330 | 1 | |
Anchor point | 1-to-many | TC0004G27820 TC0005G25260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G25330 | 1 | ||
Tree-based ortholog | many-to-1 | TC0004G27820 | 1 | ||
Vitis vinifera | Anchor point | 1-to-many | VV14G04370 VV05G03570 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G04370 | 1 | ||
Tree-based ortholog | many-to-1 | VV14G04370 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM03G17970 ZM10G05120 | 2 | |
Tree-based ortholog | many-to-many | ZM10G05120 ZM03G17970 ZM07G31170 ... | 4 |