Integrative Orthology Viewer: PT12G14270 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT02G15920 PT12G14270 PT14G08360 ... | 4 | |
Anchor point | PT15G14590 PT14G08360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT12G14270 | 1 | ||
Tree-based ortholog | PT12G14270 PT15G14590 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00010G01260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00009G02430 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00009G02430 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G17970 AL6G41130 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G17970 | 1 | ||
Tree-based ortholog | many-to-1 | AL5G17970 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G49050 AT4G00500 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G49050 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G49050 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G06740 BV3G05090 | 2 | |
Anchor point | many-to-1 | BV3G05090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G05090 | 1 | ||
Tree-based ortholog | many-to-1 | BV3G05090 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR04G07860 | 1 | |
Anchor point | many-to-1 | BR06G16590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G16590 | 1 | ||
Tree-based ortholog | many-to-1 | BR06G16590 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_005G14310 CRU_006G35530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G14310 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_005G14310 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00018G02450 CP01111G00020 | 2 | |
Anchor point | many-to-1 | CP00107G00660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00107G00660 | 1 | ||
Tree-based ortholog | many-to-1 | CP00107G00660 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G09950 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G03610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G03610 | 1 | ||
Tree-based ortholog | many-to-1 | CL01G05290 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00197G00110 | 1 | |
Anchor point | many-to-1 | CS00171G00250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00171G00250 | 1 | ||
Tree-based ortholog | many-to-1 | CS00171G00250 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00042G00350 CM00047G00810 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G04420 | 1 | ||
Tree-based ortholog | many-to-1 | CM00005G04420 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G23530 EG0005G01310 | 2 | |
Anchor point | many-to-many | EG0001G23530 EG0005G01310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G23530 | 1 | ||
Tree-based ortholog | many-to-1 | EG0001G23530 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV7G08160 FV7G38300 | 2 | |
Anchor point | many-to-1 | FV7G38290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G08160 | 1 | ||
Tree-based ortholog | many-to-1 | FV7G38290 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G37820 GM16G30140 | 2 | |
Anchor point | many-to-many | GM09G25186 GM16G30140 GM10G37820 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM10G37820 | 1 | ||
Tree-based ortholog | many-to-many | GM09G25186 GM16G30140 GM10G37820 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR01G20480 | 1 | |
Anchor point | many-to-many | GR08G27610 GR06G04840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G04840 | 1 | ||
Tree-based ortholog | many-to-many | GR08G27610 GR06G04840 | 2 | ||
Lotus japonicus | Anchor point | many-to-1 | LJ2G005590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G005590 | 1 | ||
Tree-based ortholog | many-to-many | LJ2G005590 LJ5G033100 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G125210 MD00G352420 MD01G020440 ... | 5 | |
Anchor point | many-to-many | MD07G018730 MD01G020440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD07G018730 MD01G020440 MD14G015970 | 3 | ||
Tree-based ortholog | many-to-many | MD01G020440 MD14G015970 MD07G018730 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME11179G00350 | 1 | |
Anchor point | many-to-1 | ME11179G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02658G01290 | 1 | ||
Tree-based ortholog | many-to-1 | ME11179G00350 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT8G030890 | 1 | |
Anchor point | many-to-1 | MT1G100950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G100950 | 1 | ||
Tree-based ortholog | many-to-1 | MT1G100950 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS09G39580 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G14490 | 1 | ||
Tree-based ortholog | many-to-1 | OS09G39580 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G01950 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-many | PP00009G00330 PP00009G00440 PP00016G00430 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00009G00440 PP00016G00430 PP00009G00330 | 3 | ||
Tree-based ortholog | many-to-many | PP00009G00440 PP00009G00330 PP00016G00430 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G16520 PPE_002G28400 | 2 | |
Anchor point | many-to-many | PPE_002G28400 PPE_002G16520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G28400 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_002G28400 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30174G02760 | 1 | |
Anchor point | many-to-1 | RC30169G04040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G04040 | 1 | ||
Tree-based ortholog | many-to-1 | RC30169G04040 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G094570 SL03G025510 | 2 | |
Anchor point | many-to-many | SL03G025510 SL01G094570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G025510 | 1 | ||
Tree-based ortholog | many-to-1 | SL03G025510 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G031930 ST03G015320 | 2 | |
Anchor point | many-to-many | ST03G015320 ST01G031930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G015320 | 1 | ||
Tree-based ortholog | many-to-1 | ST03G015320 | 1 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G13030 | 1 | |
Tree-based ortholog | many-to-1 | TP5G13030 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G35670 TC0004G11890 | 2 | |
Anchor point | many-to-many | TC0001G35670 TC0003G18040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G18040 | 1 | ||
Tree-based ortholog | many-to-1 | TC0003G18040 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV15G04860 | 1 | |
Anchor point | many-to-many | VV15G04860 VV16G08420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G08420 | 1 | ||
Tree-based ortholog | many-to-1 | VV16G08420 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM02G27470 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G27470 | 1 | ||
Tree-based ortholog | many-to-1 | ZM02G27470 | 1 |