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Integrative Orthology Viewer:
PT12G11460
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT00G09240 PT12G11460 PT15G11220 | 3 |  |
| Anchor point | PT15G11220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT00G09240 PT15G11220 PT12G11460 | 3 | ||
| Tree-based ortholog | PT12G11560 PT12G11460 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00002G01680 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00002G01680 | 1 | ||
| Arabidopsis lyrata | Anchor point | 1-to-1 | AL6G07160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G32540 | 1 | ||
| Tree-based ortholog | many-to-many | AL0G05190 AL6G07160 | 2 | ||
| Arabidopsis thaliana | Anchor point | 1-to-many | AT5G07450 AT5G61650 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G44740 | 1 | ||
| Tree-based ortholog | many-to-many | AT5G61650 AT5G07450 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G64040 | 1 | |
| Tree-based ortholog | many-to-1 | BV0G64040 | 1 | ||
| Brassica rapa | Anchor point | 1-to-1 | BR10G25280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G26680 | 1 | ||
| Tree-based ortholog | many-to-many | BR03G41210 BR10G25280 | 2 | ||
| Capsella rubella | Anchor point | 1-to-1 | CRU_008G21740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G26340 | 1 | ||
| Tree-based ortholog | many-to-many | CRU_008G21740 CRU_006G06290 | 2 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00013G02240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00041G00710 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00013G02240 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G11190 | 1 | |
| Tree-based ortholog | many-to-1 | CR02G11190 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G02870 | 1 | |
| Tree-based ortholog | many-to-many | CL05G02870 CL06G00680 | 2 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00092G00400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00092G00400 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00092G00400 | 1 | ||
| Cucumis melo | Anchor point | 1-to-1 | CM00031G00990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00006G03220 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00031G00990 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0005G12680 | 1 | |
| Tree-based ortholog | many-to-1 | EG0005G12680 | 1 | ||
| Fragaria vesca | Anchor point | 1-to-1 | FV7G32140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G32140 | 1 | ||
| Tree-based ortholog | many-to-1 | FV7G32140 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM09G38070 GM18G48330 | 2 | |
| Tree-based ortholog | many-to-many | GM18G48330 GM09G38070 GM07G13200 ... | 6 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR08G21330 | 1 | |
| Anchor point | 1-to-1 | GR08G21330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G21330 | 1 | ||
| Tree-based ortholog | many-to-many | GR08G21330 GR06G27390 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G036340 | 1 | |
| Tree-based ortholog | many-to-1 | LJ1G036340 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD02G020020 | 1 | |
| Tree-based ortholog | many-to-many | MD01G016560 MD00G406020 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01127G00100 ME06701G00120 | 2 | |
| Anchor point | 1-to-many | ME06701G00120 ME01127G00100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME06701G00120 ME01127G00100 | 2 | ||
| Tree-based ortholog | many-to-many | ME01127G00100 ME06701G00120 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G081130 | 1 | |
| Tree-based ortholog | many-to-many | MT7G081130 MT8G007380 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS10G41430 | 1 | |
| Tree-based ortholog | many-to-many | OS10G41430 OS02G43550 OS04G46000 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00387G00290 PP00387G00300 PP00062G00520 ... | 5 | |
| Tree-based ortholog | many-to-many | PP00008G01630 PP00387G00290 PP00044G00530 ... | 5 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_002G26010 | 1 | |
| Anchor point | 1-to-1 | PPE_002G26010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G26010 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_002G26010 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30147G02490 | 1 | |
| Anchor point | 1-to-1 | RC30147G02490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30147G02490 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30147G02490 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL03G093790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G089850 | 1 | ||
| Tree-based ortholog | many-to-1 | SL03G093790 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G029100 | 1 | |
| Tree-based ortholog | many-to-1 | ST03G016410 | 1 | ||
| Thellungiella parvula | Anchor point | 1-to-many | TP2G24860 TP6G35420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G26810 | 1 | ||
| Tree-based ortholog | many-to-many | TP2G24860 TP6G35420 | 2 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G14810 | 1 | |
| Anchor point | 1-to-many | TC0001G39340 TC0003G14810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G39340 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0003G14810 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G01340 | 1 | |
| Tree-based ortholog | many-to-many | VV16G01740 VV15G01340 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G21620 | 1 | |
| Tree-based ortholog | many-to-many | ZM01G21620 ZM05G36390 ZM02G08130 ... | 4 |