Integrative Orthology Viewer: PT12G05650 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT12G05650 PT15G04710 | 2 | |
Anchor point | PT08G12100 PT10G12440 PT17G11470 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | PT15G04710 PT12G05650 | 2 | ||
Tree-based ortholog | PT12G05650 PT15G04710 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00079G00170 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00079G00170 | 1 | ||
Arabidopsis lyrata | Anchor point | many-to-1 | AL2G16650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G16650 | 1 | ||
Tree-based ortholog | many-to-many | AL2G16650 AL1G14050 | 2 | ||
Arabidopsis thaliana | Anchor point | many-to-1 | AT1G68490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G68490 | 1 | ||
Tree-based ortholog | many-to-many | AT1G68490 AT1G13390 | 2 | ||
Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G00300 | 1 | |
Tree-based ortholog | many-to-1 | BV6G00300 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR07G25520 | 1 | |
Tree-based ortholog | many-to-many | BR02G19160 BR07G25520 BR07G22760 ... | 6 | ||
Capsella rubella | Anchor point | many-to-1 | CRU_002G14110 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CRU_006G13930 CRU_055G00030 | 2 | ||
Tree-based ortholog | many-to-many | CRU_002G14110 CRU_001G12490 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00003G05020 | 1 | |
Anchor point | many-to-1 | CP00003G05020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00003G05020 | 1 | ||
Tree-based ortholog | many-to-1 | CP00003G05020 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G15390 | 1 | |
Anchor point | many-to-many | CL05G23740 CL06G15390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL06G15390 | 1 | ||
Tree-based ortholog | many-to-1 | CL06G15390 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00090G00120 | 1 | |
Anchor point | many-to-many | CS00071G00600 CS00008G00800 CS00090G00120 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00090G00120 | 1 | ||
Tree-based ortholog | many-to-1 | CS00090G00120 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00030G02360 | 1 | |
Anchor point | many-to-many | CM00030G02360 CM00016G05890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00030G02360 | 1 | ||
Tree-based ortholog | many-to-1 | CM00030G02360 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G18410 | 1 | |
Anchor point | many-to-many | EG0011G18410 EG0007G17640 EG0006G20420 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0011G18410 | 1 | ||
Tree-based ortholog | many-to-1 | EG0011G18410 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G36070 | 1 | |
Anchor point | many-to-many | FV0G01570 FV5G36070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G36070 | 1 | ||
Tree-based ortholog | many-to-1 | FV5G36070 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G10220 GM09G31670 | 2 | |
Anchor point | many-to-many | GM08G04590 GM10G42045 GM07G10220 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM09G31670 GM08G04590 GM05G35120 ... | 4 | ||
Tree-based ortholog | many-to-many | GM09G31670 GM07G10220 GM05G35120 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G19470 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G19470 | 1 | ||
Tree-based ortholog | many-to-1 | GR06G19470 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G049600 | 1 | |
Anchor point | many-to-1 | LJ4G049600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G049600 | 1 | ||
Tree-based ortholog | many-to-1 | LJ4G049600 | 1 | ||
Malus domestica | Anchor point | many-to-many | MD13G002690 MD16G001610 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD09G023780 MD09G023790 MD00G158350 ... | 4 | ||
Tree-based ortholog | many-to-many | MD16G001610 MD13G002690 MD00G397480 ... | 5 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06446G00110 ME10493G00010 | 2 | |
Anchor point | many-to-many | ME04043G00870 ME06871G00670 ME03604G00720 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME06446G00110 ME10493G00010 | 2 | ||
Tree-based ortholog | many-to-many | ME10493G00010 ME06446G00110 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT6G084470 | 1 | |
Anchor point | many-to-many | MT1G110760 MT6G084470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G104210 | 1 | ||
Tree-based ortholog | many-to-many | MT8G104210 MT6G084470 | 2 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G40840 | 1 | |
Tree-based ortholog | many-to-1 | OS12G40840 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00065G01550 PP00048G00080 PP00007G01940 ... | 5 | |
Tree-based ortholog | many-to-many | PP00007G01940 PP00028G00700 PP00048G00080 ... | 5 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G22390 | 1 | |
Anchor point | many-to-many | PPE_001G32100 PPE_005G22390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G22390 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_005G22390 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29974G00040 | 1 | |
Anchor point | many-to-1 | RC29974G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29974G00040 | 1 | ||
Tree-based ortholog | many-to-1 | RC29974G00040 | 1 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL04G007220 SL05G009360 SL03G119480 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G009360 | 1 | ||
Tree-based ortholog | many-to-many | SL03G119520 SL03G119480 SL06G069120 ... | 4 | ||
Solanum tuberosum | Anchor point | many-to-many | ST05G008050 ST03G033020 ST12G018260 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST05G008050 | 1 | ||
Tree-based ortholog | many-to-many | ST03G033050 ST03G033020 ST06G025770 ... | 4 | ||
Thellungiella parvula | Anchor point | many-to-1 | TP5G23560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G23560 | 1 | ||
Tree-based ortholog | many-to-many | TP5G23560 TP1G11880 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G03380 | 1 | |
Anchor point | many-to-many | TC0004G14030 TC0003G03380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G03380 | 1 | ||
Tree-based ortholog | many-to-1 | TC0003G03380 | 1 | ||
Vitis vinifera | Anchor point | many-to-many | VV14G08080 VV01G07710 VV17G05990 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G07710 | 1 | ||
Tree-based ortholog | many-to-1 | VV17G05990 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G16000 | 1 | |
Tree-based ortholog | many-to-1 | ZM03G16000 | 1 |