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Integrative Orthology Viewer:
PT12G04760
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G10460 PT01G10610 PT01G24690 ... | 16 |  |
| Anchor point | PT15G03880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT12G04760 | 1 | ||
| Tree-based ortholog | PT12G04760 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00009G02590 ATR_00009G02800 ATR_00029G02560 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G00730 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00009G02590 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G15480 | 1 | |
| Tree-based ortholog | 1-to-many | AL6G23650 AL4G14060 AL5G15480 ... | 4 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G20010 AT1G75780 AT2G29550 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G12250 | 1 | ||
| Tree-based ortholog | 1-to-many | AT5G23860 AT2G29550 AT5G12250 ... | 5 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G62030 BV5G07470 BV7G05690 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G13180 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV0G08260 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G21690 | 1 | |
| Tree-based ortholog | 1-to-many | BR10G06730 BR03G41310 BR00G04360 | 3 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G18720 CRU_002G21340 CRU_004G10320 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G10470 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_004G10320 CRU_006G10470 CRU_005G12350 ... | 5 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00003G03970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00074G00110 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00003G03970 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR12G16830 CR12G15170 | 2 | |
| Tree-based ortholog | 1-to-many | CR03G10780 CR04G00210 CR06G13080 ... | 8 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G02540 CL03G07950 CL04G07290 ... | 6 | |
| Anchor point | 1-to-1 | CL04G10540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G10540 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL04G10540 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00009G00910 CS00010G00180 CS00026G00550 ... | 5 | |
| Anchor point | 1-to-1 | CS00039G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00138G00280 | 1 | ||
| Tree-based ortholog | 1-to-many | CS00009G00910 CS00039G00130 | 2 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00001G02250 CM00001G09620 CM00005G06460 ... | 5 | |
| Anchor point | 1-to-1 | CM00001G02250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G02250 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00001G02250 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G12880 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0004G14920 | 1 | ||
| Fragaria vesca | Anchor point | 1-to-1 | FV5G16740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G09100 | 1 | ||
| Tree-based ortholog | 1-to-many | FV5G02740 FV6G11430 | 2 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G26950 GM03G15020 GM04G02610 ... | 16 | |
| Anchor point | 1-to-many | GM05G33830 GM08G05850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM03G27970 | 1 | ||
| Tree-based ortholog | 1-to-many | GM05G33830 GM08G05850 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G12340 GR03G12630 GR03G15910 ... | 17 | |
| Anchor point | 1-to-1 | GR06G19190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G13250 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR06G19190 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ4G004770 LJ4G045730 LJ4G051290 ... | 5 | |
| Anchor point | 1-to-1 | LJ4G051290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G056730 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ4G051290 | 1 | ||
| Malus domestica | Anchor point | 1-to-1 | MD14G021890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD08G000880 | 1 | ||
| Tree-based ortholog | 1-to-many | MD00G097330 MD00G351550 MD14G021890 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02765G00090 ME02960G00340 ME03150G00640 ... | 12 | |
| Anchor point | 1-to-1 | ME06631G00380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06631G00380 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME06631G00380 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G101130 MT2G031310 MT3G113970 ... | 9 | |
| Anchor point | 1-to-1 | MT8G107250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G089120 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT8G107250 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G07060 OS03G01530 OS03G45920 ... | 5 | |
| Anchor point | 1-to-1 | OS03G11970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G18050 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS03G45920 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G04460 | 1 | |
| Tree-based ortholog | 1-to-many | OL08G03660 OL12G01340 OL02G02120 ... | 6 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00218G00030 PP00252G00350 PP00093G00690 ... | 6 | |
| Tree-based ortholog | 1-to-many | PP00215G00280 PP00215G00270 PP00341G00090 ... | 29 | ||
| Prunus persica | Anchor point | 1-to-1 | PPE_005G23370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G03680 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_005G10840 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC27798G00230 RC28102G00020 RC29751G00270 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G05480 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC28102G00020 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G025730 SL03G118760 SL04G081490 ... | 9 | |
| Anchor point | 1-to-1 | SL03G118760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G080940 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL03G118760 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G014260 ST03G032250 ST04G034870 ... | 9 | |
| Anchor point | 1-to-1 | ST03G032250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G027210 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST03G032250 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G31390 | 1 | |
| Tree-based ortholog | 1-to-many | TP2G23430 TP4G12280 TP6G31390 ... | 5 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0003G05420 TC0003G17890 TC0003G27280 ... | 11 | |
| Anchor point | 1-to-1 | TC0003G05420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0009G25020 TC0005G12270 | 2 | ||
| Tree-based ortholog | 1-to-1 | TC0003G05420 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV08G03620 | 1 | |
| Anchor point | 1-to-1 | VV17G07110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G06500 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV17G07110 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G00500 ZM01G48220 ZM01G52790 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G29180 ZM08G00330 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM01G48220 ZM05G06940 ZM04G10000 ... | 7 |