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Integrative Orthology Viewer:
PT12G04330
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT12G04330 | 1 |  |
| Anchor point | PT15G03060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT15G03060 PT12G04330 | 2 | ||
| Tree-based ortholog | PT15G03060 PT12G04330 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00176G00080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00176G00080 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00176G00080 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G19260 | 1 | |
| Anchor point | 1-to-1 | AL3G19260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G19260 | 1 | ||
| Tree-based ortholog | many-to-1 | AL3G19260 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G17810 | 1 | |
| Anchor point | 1-to-1 | AT3G17810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G17810 | 1 | ||
| Tree-based ortholog | many-to-1 | AT3G17810 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G48080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G48080 | 1 | ||
| Tree-based ortholog | many-to-many | BV7G18910 BV0G48080 | 2 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR01G31690 BR05G25940 | 2 | |
| Anchor point | 1-to-1 | BR05G25940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR05G25940 BR01G31690 | 2 | ||
| Tree-based ortholog | many-to-many | BR03G35290 BR05G25940 BR01G31690 | 3 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G16750 | 1 | |
| Anchor point | 1-to-1 | CRU_003G16750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G16750 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_003G16750 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00003G03610 | 1 | |
| Anchor point | 1-to-1 | CP00003G03610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00003G03610 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00003G03610 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G03880 | 1 | |
| Tree-based ortholog | many-to-1 | CR13G03880 | 1 | ||
| Citrullus lanatus | Anchor point | 1-to-1 | CL04G10350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL04G10350 | 1 | ||
| Tree-based ortholog | many-to-1 | CL04G10350 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00335G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00335G00020 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00335G00020 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00001G02460 | 1 | |
| Anchor point | 1-to-1 | CM00001G02460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00001G02460 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00001G02460 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G19000 | 1 | |
| Anchor point | 1-to-1 | EG0011G19000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0011G19000 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0011G19000 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV5G16290 | 1 | |
| Anchor point | 1-to-1 | FV5G16290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G16290 | 1 | ||
| Tree-based ortholog | many-to-1 | FV5G16290 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM09G30320 | 1 | |
| Anchor point | 1-to-many | GM07G11890 GM09G30320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM09G30320 GM07G11890 | 2 | ||
| Tree-based ortholog | many-to-many | GM07G11890 GM09G30320 | 2 | ||
| Gossypium raimondii | Anchor point | 1-to-1 | GR06G19120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G19120 | 1 | ||
| Tree-based ortholog | many-to-1 | GR06G19120 | 1 | ||
| Lotus japonicus | Anchor point | 1-to-1 | LJ2G010490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G010490 | 1 | ||
| Tree-based ortholog | many-to-1 | LJ2G010490 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G296220 MD06G019440 | 2 | |
| Anchor point | 1-to-1 | MD06G019440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G296220 MD06G019440 | 2 | ||
| Tree-based ortholog | many-to-many | MD00G168670 MD00G342580 MD06G019440 ... | 4 | ||
| Manihot esculenta | Anchor point | 1-to-1 | ME11170G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME11170G00060 | 1 | ||
| Tree-based ortholog | many-to-1 | ME11170G00060 | 1 | ||
| Medicago truncatula | Anchor point | 1-to-1 | MT6G071210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT6G071210 | 1 | ||
| Tree-based ortholog | many-to-1 | MT6G071210 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS02G50350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G50350 | 1 | ||
| Tree-based ortholog | many-to-1 | OS02G50350 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00040G00350 PP00294G00220 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00040G00350 PP00294G00220 | 2 | ||
| Tree-based ortholog | many-to-many | PP00294G00220 PP00040G00350 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_005G23750 | 1 | |
| Anchor point | 1-to-1 | PPE_005G23750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G23750 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_005G23750 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC27791G00030 | 1 | |
| Tree-based ortholog | many-to-1 | RC27791G00030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G097910 | 1 | |
| Anchor point | 1-to-1 | SL03G097910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G097910 | 1 | ||
| Tree-based ortholog | many-to-many | SL03G097910 SL02G044040 | 2 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G022550 | 1 | |
| Anchor point | 1-to-1 | ST03G022550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G022550 | 1 | ||
| Tree-based ortholog | many-to-1 | ST03G022550 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G15930 | 1 | |
| Anchor point | 1-to-1 | TP3G15930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G15930 | 1 | ||
| Tree-based ortholog | many-to-1 | TP3G15930 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G06280 | 1 | |
| Anchor point | 1-to-1 | TC0003G06280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G06280 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0003G06280 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV17G07560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV17G07560 | 1 | ||
| Tree-based ortholog | many-to-1 | VV17G07560 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM05G39610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G39610 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM05G39610 | 1 |