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Integrative Orthology Viewer:
PT11G16250
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G10460 PT01G10610 PT01G24690 ... | 16 |  |
| Anchor point | PT01G46440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT11G16250 | 1 | ||
| Tree-based ortholog | PT11G16250 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00009G02590 ATR_00009G02800 ATR_00029G02560 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00032G00350 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00032G00350 | 1 | ||
| Arabidopsis lyrata | Anchor point | 1-to-many | AL4G20030 AL7G21810 AL8G05460 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G20030 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL4G20030 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G20010 AT1G75780 AT2G29550 ... | 8 | |
| Anchor point | 1-to-1 | AT4G20890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G23860 | 1 | ||
| Tree-based ortholog | 1-to-many | AT1G20010 AT1G75780 AT1G64740 ... | 12 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G62030 BV5G07470 BV7G05690 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G62030 | 1 | ||
| Tree-based ortholog | 1-to-many | BV0G62030 BV4G11350 BV0G10250 ... | 7 | ||
| Brassica rapa | Anchor point | 1-to-many | BR05G09810 BR01G11260 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G13930 | 1 | ||
| Tree-based ortholog | 1-to-many | BR07G31030 BR05G09810 BR02G09750 ... | 17 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G18720 CRU_002G21340 CRU_004G10320 ... | 8 | |
| Anchor point | 1-to-1 | CRU_007G19580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G10320 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_002G21340 CRU_001G18720 CRU_002G09090 ... | 11 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00074G00110 | 1 | |
| Tree-based ortholog | 1-to-many | CP00092G00750 CP00074G00450 CP00119G00500 ... | 8 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR12G16830 CR12G15170 | 2 | |
| Tree-based ortholog | 1-to-many | CR12G15170 CR12G16830 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G02540 CL03G07950 CL04G07290 ... | 6 | |
| Anchor point | 1-to-1 | CL03G07950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G07950 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL03G07950 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00009G00910 CS00010G00180 CS00026G00550 ... | 5 | |
| Anchor point | 1-to-1 | CS00010G00180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00010G00180 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00010G00180 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00001G02250 CM00001G09620 CM00005G06460 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G09620 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00001G09620 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G12880 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0004G12880 | 1 | ||
| Fragaria vesca | Anchor point | 1-to-1 | FV3G09100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G09100 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV3G09100 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G26950 GM03G15020 GM04G02610 ... | 16 | |
| Anchor point | 1-to-many | GM09G03020 GM15G13970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G03020 GM15G13970 | 2 | ||
| Tree-based ortholog | 1-to-many | GM05G25610 GM08G08590 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G12340 GR03G12630 GR03G15910 ... | 17 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G11560 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR05G11810 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ4G004770 LJ4G045730 LJ4G051290 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G004770 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ6G020080 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G164860 | 1 | |
| Tree-based ortholog | 1-to-many | MD08G000880 MD00G263580 MD03G005890 ... | 42 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02765G00090 ME02960G00340 ME03150G00640 ... | 12 | |
| Anchor point | 1-to-1 | ME07478G00930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07478G00930 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME07478G00930 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G101130 MT2G031310 MT3G113970 ... | 9 | |
| Anchor point | 1-to-1 | MT4G094535 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G031310 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT2G031310 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G07060 OS03G01530 OS03G45920 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G56810 | 1 | ||
| Tree-based ortholog | 1-to-many | OS03G56810 OS02G07060 OS06G46000 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G04460 | 1 | |
| Tree-based ortholog | 1-to-many | OL01G02190 OL01G04460 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00218G00030 PP00252G00350 PP00093G00690 ... | 6 | |
| Tree-based ortholog | 1-to-many | PP00085G00830 PP00085G00770 PP00085G00760 ... | 11 | ||
| Prunus persica | Anchor point | 1-to-1 | PPE_004G09050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G09050 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_004G09050 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC27798G00230 RC28102G00020 RC29751G00270 ... | 8 | |
| Anchor point | 1-to-1 | RC30075G00300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30075G00300 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30075G00300 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G025730 SL03G118760 SL04G081490 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G035970 | 1 | ||
| Tree-based ortholog | 1-to-many | SL04G081490 SL02G091870 SL04G077020 ... | 10 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G014260 ST03G032250 ST04G034870 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G015780 | 1 | ||
| Tree-based ortholog | 1-to-many | ST04G034870 ST09G013840 ST12G032790 ... | 14 | ||
| Thellungiella parvula | Anchor point | 1-to-1 | TP7G18980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G12280 | 1 | ||
| Tree-based ortholog | 1-to-many | TP5G30900 TP4G01790 TP6G24620 ... | 6 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0003G05420 TC0003G17890 TC0003G27280 ... | 11 | |
| Anchor point | 1-to-1 | TC0003G17890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G00350 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0006G00350 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV08G03620 | 1 | |
| Anchor point | 1-to-1 | VV10G05850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G06500 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV10G05850 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G00500 ZM01G48220 ZM01G52790 ... | 6 | |
| Anchor point | 1-to-1 | ZM03G10040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G03210 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM01G52790 ZM05G20150 | 2 |