Integrative Orthology Viewer: PT10G16280 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT10G16280 | 1 | |
Anchor point | PT08G09200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT10G16280 PT08G09200 | 2 | ||
Tree-based ortholog | PT10G16280 PT08G09200 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Anchor point | 1-to-1 | ATR_00058G00530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00065G01940 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00058G00530 | 1 | ||
Arabidopsis lyrata | Anchor point | 1-to-many | AL2G17660 AL1G14690 AL1G27000 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G14690 | 1 | ||
Tree-based ortholog | many-to-1 | AL1G14690 | 1 | ||
Arabidopsis thaliana | Anchor point | 1-to-many | AT1G69410 AT1G26630 AT1G13950 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G13950 | 1 | ||
Tree-based ortholog | many-to-1 | AT1G13950 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G01890 | 1 | |
Anchor point | 1-to-1 | BV6G01870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV6G01870 BV6G01900 | 2 | ||
Tree-based ortholog | many-to-many | BV6G01870 BV6G01900 BV6G01890 | 3 | ||
Brassica rapa | Anchor point | 1-to-many | BR09G29950 BR07G08250 BR07G26180 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR07G26180 | 1 | ||
Tree-based ortholog | many-to-1 | BR07G26180 | 1 | ||
Capsella rubella | Anchor point | 1-to-many | CRU_002G15050 CRU_001G23440 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G15050 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_002G15050 | 1 | ||
Carica papaya | Anchor point | 1-to-1 | CP00001G00770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP01469G00020 | 1 | ||
Tree-based ortholog | many-to-many | CP01469G00020 CP00001G00770 | 2 | ||
Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR02G06630 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G06630 | 1 | ||
Tree-based ortholog | many-to-1 | CR02G06630 | 1 | ||
Citrullus lanatus | Anchor point | 1-to-1 | CL05G24930 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL06G12960 | 1 | ||
Tree-based ortholog | many-to-1 | CL05G24930 | 1 | ||
Citrus sinensis | Anchor point | 1-to-1 | CS00003G04900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00068G00690 | 1 | ||
Tree-based ortholog | many-to-1 | CS00068G00690 | 1 | ||
Cucumis melo | Anchor point | 1-to-1 | CM00016G04590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00012G02390 | 1 | ||
Tree-based ortholog | many-to-many | CM00016G04590 CM00023G00080 | 2 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0007G19010 EG0011G20790 | 2 | |
Anchor point | 1-to-many | EG0007G19010 EG0002G04770 EG0011G20790 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0003G02810 | 1 | ||
Tree-based ortholog | many-to-1 | EG0007G19010 | 1 | ||
Fragaria vesca | Anchor point | 1-to-1 | FV0G04730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G04730 | 1 | ||
Tree-based ortholog | many-to-many | FV3G28230 FV0G04730 | 2 | ||
Glycine max | Anchor point | 1-to-many | GM01G06600 GM06G21290 GM05G00780 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM01G06600 GM02G12520 | 2 | ||
Tree-based ortholog | many-to-many | GM06G21290 GM05G00780 GM17G11130 ... | 6 | ||
Gossypium raimondii | Anchor point | 1-to-many | GR05G14380 GR08G17870 GR03G09870 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR05G14380 | 1 | ||
Tree-based ortholog | many-to-many | GR04G13070 GR05G02420 GR07G03870 ... | 9 | ||
Lotus japonicus | Anchor point | 1-to-1 | LJ4G029450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G008140 | 1 | ||
Tree-based ortholog | many-to-many | LJ1G008140 LJ4G029450 | 2 | ||
Malus domestica | Anchor point | 1-to-many | MD16G003380 MD00G250490 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD15G008630 MD00G340010 | 2 | ||
Tree-based ortholog | many-to-many | MD09G003930 MD00G250530 MD16G003380 ... | 4 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME08359G01970 | 1 | |
Anchor point | 1-to-many | ME08359G01970 ME04233G00050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME04233G00050 | 1 | ||
Tree-based ortholog | many-to-1 | ME04233G00050 | 1 | ||
Medicago truncatula | Anchor point | 1-to-many | MT5G042990 MT4G109130 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G130917 | 1 | ||
Tree-based ortholog | many-to-many | MT4G130907 MT3G437680 MT4G109130 ... | 4 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS07G40580 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G32240 | 1 | ||
Tree-based ortholog | many-to-many | OS07G13230 OS12G32240 OS03G55150 | 3 | ||
Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL01G03490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G03490 | 1 | ||
Tree-based ortholog | many-to-1 | OL01G03490 | 1 | ||
Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00462G00080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00462G00080 | 1 | ||
Tree-based ortholog | many-to-1 | PP00462G00080 | 1 | ||
Prunus persica | Anchor point | 1-to-1 | PPE_001G29240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G27860 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_001G29240 | 1 | ||
Ricinus communis | Anchor point | 1-to-many | RC30138G01990 RC30174G05550 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30174G05550 | 1 | ||
Tree-based ortholog | many-to-1 | RC30174G05550 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL05G006890 | 1 | |
Anchor point | 1-to-many | SL03G115650 SL01G011000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G011000 | 1 | ||
Tree-based ortholog | many-to-many | SL01G011000 SL05G006890 SL03G115650 | 3 | ||
Solanum tuberosum | Anchor point | 1-to-many | ST03G029130 ST04G005130 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ST01G016040 ST04G005130 | 2 | ||
Tree-based ortholog | many-to-many | ST04G005130 ST01G016040 | 2 | ||
Thellungiella parvula | Anchor point | 1-to-many | TP1G22170 TP5G24460 TP1G12310 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G24460 | 1 | ||
Tree-based ortholog | many-to-1 | TP1G12310 | 1 | ||
Theobroma cacao | Anchor point | 1-to-many | TC0002G33700 TC0003G09760 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G02970 | 1 | ||
Tree-based ortholog | many-to-1 | TC0009G02970 | 1 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV17G03270 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G24200 | 1 | ||
Tree-based ortholog | many-to-many | VV04G13060 VV00G24200 | 2 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM02G38250 ZM07G26260 | 2 | |
Tree-based ortholog | many-to-1 | ZM02G47060 | 1 |