Integrative Orthology Viewer: PT08G11730 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G11730 | 1 | |
Anchor point | PT17G11240 PT04G10250 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT08G11730 | 1 | ||
Tree-based ortholog | PT08G11730 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00065G01000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00065G01000 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00065G01000 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G04240 | 1 | |
Anchor point | many-to-many | AL5G04220 AL1G13920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G04240 | 1 | ||
Tree-based ortholog | 1-to-many | AL5G04220 AL5G04230 AL1G13920 ... | 4 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT3G25760 AT3G25780 | 2 | |
Anchor point | many-to-many | AT3G25760 AT1G13280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G25780 | 1 | ||
Tree-based ortholog | 1-to-many | AT3G25770 AT3G25760 AT1G13280 ... | 4 | ||
Beta vulgaris | Anchor point | many-to-1 | BV2G06840 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G06840 | 1 | ||
Tree-based ortholog | 1-to-1 | BV2G06840 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR09G20900 | 1 | |
Anchor point | many-to-many | BR09G20900 BR06G34040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G20900 | 1 | ||
Tree-based ortholog | 1-to-many | BR09G20910 BR08G27830 BR06G34040 ... | 4 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G03290 | 1 | |
Anchor point | many-to-many | CRU_005G03270 CRU_001G12400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G03290 | 1 | ||
Tree-based ortholog | 1-to-many | CRU_005G03270 CRU_005G03280 CRU_001G12400 ... | 4 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00179G00260 | 1 | |
Tree-based ortholog | 1-to-1 | CP00179G00260 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL03G09400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G09400 | 1 | ||
Tree-based ortholog | 1-to-1 | CL03G09400 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00019G00690 | 1 | |
Anchor point | many-to-1 | CS00019G00690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00019G00690 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00019G00690 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM01595G01520 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01595G01520 | 1 | ||
Tree-based ortholog | 1-to-1 | CM01595G01520 | 1 | ||
Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G20300 | 1 | |
Tree-based ortholog | 1-to-1 | EG0006G20300 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G02350 | 1 | |
Anchor point | many-to-many | FV0G02350 FV6G40960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G02350 | 1 | ||
Tree-based ortholog | 1-to-1 | FV0G02350 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM01G22160 GM02G11020 | 2 | |
Anchor point | many-to-many | GM02G11020 GM01G22160 GM08G28750 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G11020 GM01G22160 | 2 | ||
Tree-based ortholog | 1-to-many | GM02G11020 GM01G22160 | 2 | ||
Gossypium raimondii | Orthologous gene family | 1-to-1 | GR08G18560 | 1 | |
Anchor point | many-to-1 | GR08G18560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G18560 | 1 | ||
Tree-based ortholog | 1-to-1 | GR08G18560 | 1 | ||
Lotus japonicus | Orthologous gene family | 1-to-1 | LJ2G018820 | 1 | |
Anchor point | many-to-1 | LJ2G018820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G018820 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ2G018820 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD00G160660 MD00G355940 MD13G002960 ... | 4 | |
Anchor point | many-to-many | MD16G001980 MD13G002960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD16G001980 MD00G160660 MD13G002960 ... | 4 | ||
Tree-based ortholog | 1-to-many | MD16G001980 MD00G160660 MD13G002960 ... | 4 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME08359G00480 | 1 | |
Anchor point | many-to-many | ME08359G00480 ME06871G00870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08359G00480 | 1 | ||
Tree-based ortholog | 1-to-1 | ME08359G00480 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-1 | MT5G053950 | 1 | |
Anchor point | many-to-1 | MT5G053950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G053950 | 1 | ||
Tree-based ortholog | 1-to-1 | MT5G053950 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G32314 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G32314 | 1 | ||
Tree-based ortholog | 1-to-1 | OS03G32314 | 1 | ||
Physcomitrella patens | Orthologous gene family | 1-to-many | PP00001G00890 PP00378G00040 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00378G00040 PP00001G00890 | 2 | ||
Tree-based ortholog | 1-to-many | PP00135G00040 PP00135G00020 PP00264G00170 ... | 6 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G31610 | 1 | |
Anchor point | many-to-1 | PPE_001G31610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G31610 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_001G31610 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29738G00540 | 1 | |
Anchor point | many-to-1 | RC29738G00540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29738G00540 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29738G00540 | 1 | ||
Solanum lycopersicum | Anchor point | many-to-1 | SL02G085730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G085730 | 1 | ||
Tree-based ortholog | 1-to-1 | SL02G085730 | 1 | ||
Solanum tuberosum | Anchor point | many-to-1 | ST02G028860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G028860 | 1 | ||
Tree-based ortholog | 1-to-1 | ST02G028860 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G15020 | 1 | |
Anchor point | many-to-many | TP2G15000 TP1G11790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G15020 | 1 | ||
Tree-based ortholog | 1-to-many | TP2G15000 TP1G11790 TP2G15020 | 3 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G35800 | 1 | |
Anchor point | many-to-many | TC0004G14400 TC0002G35800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G35800 | 1 | ||
Tree-based ortholog | 1-to-1 | TC0002G35800 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV01G08160 | 1 | |
Anchor point | many-to-many | VV01G08160 VV14G15320 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G08160 | 1 | ||
Tree-based ortholog | 1-to-1 | VV01G08160 | 1 | ||
Zea mays | Orthologous gene family | 1-to-many | ZM01G18750 ZM09G19960 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G19960 ZM01G18750 | 2 | ||
Tree-based ortholog | 1-to-many | ZM09G19960 ZM01G18750 | 2 |