Integrative Orthology Viewer: PT08G06830 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G25210 PT01G25230 PT08G06830 ... | 7 | |
Anchor point | PT01G25210 PT09G04660 PT10G18880 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT08G06830 PT10G18890 | 2 | ||
Tree-based ortholog | PT10G18890 PT08G06830 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00007G00330 ATR_00007G00340 | 2 | |
Anchor point | many-to-1 | ATR_00007G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00007G00330 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00007G00330 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G26810 AL5G26150 AL7G00390 ... | 5 | |
Anchor point | many-to-many | AL5G26150 AL8G24630 AL4G26810 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G26810 | 1 | ||
Tree-based ortholog | many-to-1 | AL4G26810 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G40116 AT3G08510 AT3G55940 ... | 7 | |
Anchor point | many-to-many | AT2G40116 AT3G55940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G40116 | 1 | ||
Tree-based ortholog | many-to-1 | AT2G40116 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G04310 BV2G04330 BV7G04880 ... | 6 | |
Anchor point | many-to-many | BV2G04310 BV7G04880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV2G04330 | 1 | ||
Tree-based ortholog | many-to-1 | BV2G04330 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G39350 BR02G12720 BR02G12740 ... | 14 | |
Anchor point | many-to-many | BR09G36690 BR05G05760 BR03G20160 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G20160 | 1 | ||
Tree-based ortholog | many-to-many | BR03G20160 BR04G23850 BR05G05760 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G07320 CRU_004G21570 CRU_005G20740 ... | 8 | |
Anchor point | many-to-many | CRU_005G21370 CRU_004G21570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G21570 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_004G21570 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00019G01720 CP00112G00110 CP00112G00210 ... | 4 | |
Anchor point | many-to-many | CP00019G01720 CP00112G00110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00112G00220 | 1 | ||
Tree-based ortholog | many-to-many | CP00112G00180 CP00112G00150 CP00112G00210 ... | 6 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G04830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G04830 | 1 | ||
Tree-based ortholog | many-to-1 | CR06G04830 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G00740 CL03G00750 CL07G04130 ... | 4 | |
Anchor point | many-to-many | CL03G00740 CL11G01160 CL07G04130 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G01160 | 1 | ||
Tree-based ortholog | many-to-1 | CL11G01160 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00021G00590 CS00026G01170 CS00026G01180 ... | 5 | |
Anchor point | many-to-many | CS00021G00590 CS00026G01170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00026G01170 | 1 | ||
Tree-based ortholog | many-to-1 | CS00021G00600 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00008G02430 CM00044G00750 CM00044G00760 ... | 4 | |
Anchor point | many-to-many | CM00008G02430 CM00075G00680 CM00044G00750 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00008G02430 | 1 | ||
Tree-based ortholog | many-to-1 | CM00008G02430 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G17840 EG0007G24310 EG0010G01850 ... | 8 | |
Anchor point | many-to-many | EG0010G01850 EG0002G17840 EG0010G16250 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G17840 | 1 | ||
Tree-based ortholog | many-to-1 | EG0010G01870 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G22520 FV3G22550 FV7G29460 | 3 | |
Anchor point | many-to-1 | FV7G29460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G29460 | 1 | ||
Tree-based ortholog | many-to-1 | FV3G22520 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G39190 GM02G42410 GM02G42420 ... | 15 | |
Anchor point | many-to-many | GM11G35290 GM02G39190 GM02G42410 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM11G35300 GM14G06460 GM18G03100 | 3 | ||
Tree-based ortholog | many-to-many | GM14G06460 GM02G42420 GM11G35300 ... | 9 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G10640 GR09G09140 GR09G09160 ... | 9 | |
Anchor point | many-to-many | GR11G28800 GR09G09140 GR12G07690 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR10G19800 | 1 | ||
Tree-based ortholog | many-to-1 | GR10G19800 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G039080 LJ2G042120 LJ6G005540 ... | 4 | |
Anchor point | many-to-many | LJ6G005540 LJ2G042120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G039080 | 1 | ||
Tree-based ortholog | many-to-1 | LJ6G005580 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G053420 MD00G316810 MD01G014700 ... | 7 | |
Anchor point | many-to-many | MD04G001870 MD03G005120 MD01G014700 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD04G001870 | 1 | ||
Tree-based ortholog | many-to-1 | MD01G014700 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00506G00020 ME03150G00160 ME06512G02410 ... | 7 | |
Anchor point | many-to-many | ME10689G00790 ME03150G00160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME10689G00800 | 1 | ||
Tree-based ortholog | many-to-1 | ME10689G00800 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G069280 MT3G070560 MT3G070710 ... | 9 | |
Anchor point | many-to-many | MT3G070560 MT5G082580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G071010 | 1 | ||
Tree-based ortholog | many-to-many | MT5G082590 MT5G082580 MT3G070560 ... | 4 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G18010 OS05G03610 OS07G49330 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G49330 | 1 | ||
Tree-based ortholog | many-to-1 | OS05G03610 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL08G01150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL08G01150 | 1 | ||
Tree-based ortholog | many-to-1 | OL08G01150 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00101G00920 PP00134G00290 PP00192G00450 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00101G00920 PP00192G00450 PP00134G00290 | 3 | ||
Tree-based ortholog | many-to-many | PP00101G00920 PP00134G00290 PP00192G00450 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G24020 PPE_002G24030 PPE_006G00150 ... | 5 | |
Anchor point | many-to-many | PPE_002G24020 PPE_006G00150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G00160 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_002G24020 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28833G00070 RC28833G00080 RC29681G00570 ... | 6 | |
Anchor point | many-to-many | RC29681G00570 RC28833G00070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28833G00070 | 1 | ||
Tree-based ortholog | many-to-1 | RC28833G00070 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL05G052760 SL06G007120 SL06G051620 ... | 6 | |
Anchor point | many-to-many | SL10G076710 SL05G052760 SL06G082000 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G051630 | 1 | ||
Tree-based ortholog | many-to-many | SL03G096070 SL06G051630 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST05G025410 ST06G006120 ST06G014570 ... | 6 | |
Anchor point | many-to-many | ST05G025410 ST06G014570 ST10G027540 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST06G006120 | 1 | ||
Tree-based ortholog | many-to-many | ST03G020740 ST06G014580 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G07000 TP4G22440 TP5G06590 ... | 8 | |
Anchor point | many-to-many | TP6G20370 TP4G22440 TP5G06590 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G22440 | 1 | ||
Tree-based ortholog | many-to-1 | TP4G22440 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0009G29580 TC0009G29590 TC0009G29610 ... | 5 | |
Anchor point | many-to-1 | TC0009G29580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0010G01560 | 1 | ||
Tree-based ortholog | many-to-1 | TC0010G01560 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV06G01730 VV06G01740 VV06G01750 ... | 7 | |
Anchor point | many-to-many | VV06G01750 VV08G12900 VV13G10450 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G10450 | 1 | ||
Tree-based ortholog | many-to-1 | VV13G10450 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G12270 ZM02G41410 ZM05G16640 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G41410 | 1 | ||
Tree-based ortholog | many-to-1 | ZM09G20780 | 1 |