Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT08G03190
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT08G03190 | 1 |  |
| Anchor point | PT10G22980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT08G03190 | 1 | ||
| Tree-based ortholog | PT08G03190 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G00510 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00003G00510 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G25780 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G25780 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G55620 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G55620 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G00060 | 1 | |
| Tree-based ortholog | 1-to-1 | BV7G00060 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G03850 | 1 | |
| Tree-based ortholog | 1-to-many | BR04G03850 BR09G36480 | 2 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G21030 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_005G21030 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G04030 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00006G04030 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G05300 | 1 | |
| Tree-based ortholog | 1-to-1 | CR13G05300 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL06G12570 CL02G01850 | 2 | |
| Tree-based ortholog | 1-to-many | CL06G12570 CL02G01850 | 2 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00017G02430 | 1 | |
| Tree-based ortholog | 1-to-many | CS00022G00180 CS00017G02430 | 2 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CM00025G01010 CM00059G00280 | 2 | |
| Tree-based ortholog | 1-to-many | CM00025G01010 CM00059G00280 | 2 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G22150 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0010G22150 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G07900 | 1 | |
| Tree-based ortholog | 1-to-many | FV0G07900 FV2G22820 | 2 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G33370 GM09G28640 GM20G35750 | 3 | |
| Tree-based ortholog | 1-to-1 | GM16G33360 | 1 | ||
| Gossypium raimondii | Anchor point | 1-to-many | GR09G30910 GR11G23410 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR11G23410 GR09G30910 | 2 | ||
| Tree-based ortholog | 1-to-many | GR09G30910 GR11G23410 | 2 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G032960 | 1 | |
| Tree-based ortholog | 1-to-1 | MD01G013740 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07520G03630 | 1 | |
| Tree-based ortholog | 1-to-1 | ME07520G03630 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G065670 | 1 | |
| Tree-based ortholog | 1-to-1 | MT6G065670 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G44620 | 1 | |
| Tree-based ortholog | 1-to-many | OS07G44620 OS01G17330 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G04440 OL02G04430 | 2 | |
| Tree-based ortholog | 1-to-many | OL02G04440 OL02G04430 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00403G00230 PP00222G00230 | 2 | |
| Tree-based ortholog | 1-to-many | PP00222G00230 PP00403G00230 | 2 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G02270 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_008G02270 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28592G00080 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28592G00080 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL00G007270 | 1 | |
| Tree-based ortholog | 1-to-many | SL02G082360 SL12G010210 | 2 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G007230 | 1 | |
| Tree-based ortholog | 1-to-many | ST02G025740 ST12G007660 | 2 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TP5G24410 TP5G06850 | 2 | |
| Tree-based ortholog | 1-to-many | TP5G06850 TP5G24410 | 2 | ||
| Theobroma cacao | Anchor point | 1-to-1 | TC0010G08430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G08430 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0010G08430 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G07060 | 1 | |
| Tree-based ortholog | 1-to-1 | VV07G07060 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G00380 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM08G00380 | 1 |