Integrative Orthology Viewer: PT07G14730 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT07G14730 PT17G00030 | 2 | |
Anchor point | PT17G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT07G14730 | 1 | ||
Tree-based ortholog | PT17G00030 PT07G14730 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00147G00450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00147G00450 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00147G00450 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G31800 AL4G31840 AL5G30570 | 3 | |
Anchor point | 1-to-many | AL4G31800 AL5G30570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G31800 | 1 | ||
Tree-based ortholog | many-to-1 | AL6G32090 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G44160 AT3G59970 | 2 | |
Anchor point | 1-to-many | AT2G44160 AT3G59970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G44160 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G59970 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G15040 | 1 | |
Anchor point | 1-to-1 | BV3G15040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G15040 | 1 | ||
Tree-based ortholog | many-to-1 | BV3G15040 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR04G26420 BR05G04010 BR07G16380 ... | 4 | |
Anchor point | 1-to-many | BR04G26420 BR09G39640 BR05G04010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G39640 BR07G16380 | 2 | ||
Tree-based ortholog | many-to-many | BR09G39640 BR07G16380 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_004G25720 CRU_005G25300 | 2 | |
Anchor point | 1-to-many | CRU_004G25720 CRU_005G25300 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G25720 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_005G25300 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00009G02280 | 1 | |
Anchor point | 1-to-1 | CP00009G02280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G02280 | 1 | ||
Tree-based ortholog | many-to-1 | CP00009G02280 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR10G03550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G03550 | 1 | ||
Tree-based ortholog | many-to-1 | CR10G03550 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G08460 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G08460 | 1 | ||
Tree-based ortholog | many-to-1 | CL06G08460 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00324G00200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00324G00200 | 1 | ||
Tree-based ortholog | many-to-1 | CS00324G00200 | 1 | ||
Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00043G00710 | 1 | |
Tree-based ortholog | many-to-1 | CM00043G00710 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G03070 | 1 | |
Anchor point | 1-to-1 | EG0001G03070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G03070 | 1 | ||
Tree-based ortholog | many-to-1 | EG0001G03080 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G02590 FV1G10590 | 2 | |
Anchor point | 1-to-1 | FV1G02590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G02590 | 1 | ||
Tree-based ortholog | many-to-many | FV1G02590 FV6G20190 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G43540 GM06G48360 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G48360 GM04G43540 | 2 | ||
Tree-based ortholog | many-to-many | GM04G43540 GM06G48360 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G22360 GR11G15340 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR06G22360 GR11G15340 | 2 | ||
Tree-based ortholog | many-to-1 | GR06G22360 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G029300 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G029300 | 1 | ||
Tree-based ortholog | many-to-1 | LJ6G029300 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G467400 MD15G007810 | 2 | |
Anchor point | 1-to-1 | MD15G007810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G007810 | 1 | ||
Tree-based ortholog | many-to-many | MD00G337180 MD15G007810 MD15G021910 ... | 6 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME03203G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03203G00010 | 1 | ||
Tree-based ortholog | many-to-1 | ME03203G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G040105 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G040105 | 1 | ||
Tree-based ortholog | many-to-1 | MT1G040105 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G60090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G60090 | 1 | ||
Tree-based ortholog | many-to-1 | OS03G60090 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00032G00490 PP00535G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00535G00010 PP00032G00490 | 2 | ||
Tree-based ortholog | many-to-many | PP00535G00010 PP00032G00490 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G28770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G28770 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_007G28770 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28966G00230 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28966G00230 | 1 | ||
Tree-based ortholog | many-to-1 | RC28966G00230 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL05G055730 SL11G008870 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G008870 | 1 | ||
Tree-based ortholog | many-to-many | SL05G055730 SL11G008870 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST05G028920 ST11G009840 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G009840 | 1 | ||
Tree-based ortholog | many-to-many | ST11G009840 ST05G028920 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G26240 TP5G03210 | 2 | |
Anchor point | 1-to-many | TP5G03210 TP4G26240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G26240 | 1 | ||
Tree-based ortholog | many-to-1 | TP5G03210 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G20050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G20050 | 1 | ||
Tree-based ortholog | many-to-1 | TC0004G20050 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV15G03150 | 1 | |
Anchor point | 1-to-1 | VV05G14230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G03150 | 1 | ||
Tree-based ortholog | many-to-many | VV15G03150 VV05G14230 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G57480 ZM05G01790 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G57480 | 1 | ||
Tree-based ortholog | many-to-many | ZM05G01810 ZM05G01790 ZM01G57480 | 3 |