Integrative Orthology Viewer: PT07G05590 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT07G05590 PT07G08520 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | PT07G08520 PT07G05590 | 2 | ||
Tree-based ortholog | PT07G08520 PT05G08260 PT07G05590 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00022G02530 ATR_00065G00490 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00065G00490 ATR_00022G02530 | 2 | ||
Tree-based ortholog | many-to-many | ATR_00065G00490 ATR_00022G02530 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G19320 | 1 | |
Anchor point | N/A | AL8G32940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G19320 | 1 | ||
Tree-based ortholog | many-to-many | AL8G32940 AL5G19320 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G49910 | 1 | |
Anchor point | N/A | AT5G67510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G49910 | 1 | ||
Tree-based ortholog | many-to-many | AT5G67510 AT3G49910 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G07640 BV6G23560 | 2 | |
Anchor point | N/A | BV6G23560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G23560 | 1 | ||
Tree-based ortholog | many-to-1 | BV6G23560 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G24000 BR03G41380 BR09G31950 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR01G24000 BR09G31950 | 2 | ||
Tree-based ortholog | many-to-many | BR09G31950 BR01G24000 BR03G41380 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G15210 | 1 | |
Anchor point | N/A | CRU_008G26130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G15210 | 1 | ||
Tree-based ortholog | many-to-many | CRU_008G26130 CRU_005G15210 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP34170G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP34170G00010 | 1 | ||
Tree-based ortholog | many-to-1 | CP34170G00010 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G08660 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G08660 | 1 | ||
Tree-based ortholog | many-to-1 | CR01G08660 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G12940 | 1 | |
Anchor point | N/A | CL01G17880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G12940 | 1 | ||
Tree-based ortholog | many-to-many | CL02G12940 CL01G17880 | 2 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00006G00770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00006G00770 | 1 | ||
Tree-based ortholog | many-to-1 | CS00006G00770 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00045G01920 | 1 | |
Anchor point | N/A | CM00007G06630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00045G01920 | 1 | ||
Tree-based ortholog | many-to-many | CM00045G01920 CM00007G06630 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0009G05650 | 1 | |
Anchor point | N/A | EG0009G05650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G05650 | 1 | ||
Tree-based ortholog | many-to-many | EG0009G05650 EG0009G05660 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G19260 | 1 | |
Anchor point | N/A | FV0G19260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G19260 | 1 | ||
Tree-based ortholog | many-to-many | FV5G33670 FV0G18080 FV0G19260 | 3 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G40150 GM11G05160 GM13G31650 ... | 5 | |
Anchor point | N/A | GM11G05160 GM01G40150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM01G40150 GM11G05160 | 2 | ||
Tree-based ortholog | many-to-many | GM11G05160 GM01G40150 GM13G10386 ... | 5 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR04G26310 | 1 | |
Anchor point | N/A | GR07G05650 GR11G10810 GR03G03000 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G26310 | 1 | ||
Tree-based ortholog | many-to-1 | GR03G03000 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G032310 | 1 | |
Anchor point | N/A | LJ2G032310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G032310 | 1 | ||
Tree-based ortholog | many-to-1 | LJ2G032310 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G101400 MD00G130470 MD00G320650 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G320650 MD00G130470 MD14G016030 ... | 5 | ||
Tree-based ortholog | many-to-many | MD15G003600 MD00G320650 MD14G016030 ... | 10 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03363G00270 ME12622G00100 | 2 | |
Anchor point | N/A | ME03363G00270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME12622G00100 ME03363G00270 | 2 | ||
Tree-based ortholog | many-to-many | ME03363G00270 ME12622G00100 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G012450 MT5G096540 | 2 | |
Anchor point | N/A | MT5G015570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT2G012450 | 1 | ||
Tree-based ortholog | many-to-many | MT2G012450 MT5G015570 MT5G096540 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G04730 OS12G05430 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS12G05430 OS01G04730 | 2 | ||
Tree-based ortholog | many-to-many | OS11G05370 OS12G05430 OS01G04730 | 3 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL12G01050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G01050 | 1 | ||
Tree-based ortholog | many-to-1 | OL12G01050 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00013G00700 PP00030G01480 PP00059G00250 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00030G01480 PP00069G00940 PP00120G00520 ... | 5 | ||
Tree-based ortholog | many-to-many | PP00069G00940 PP00059G00250 PP00013G00700 ... | 6 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_006G23050 PPE_010G00280 | 2 | |
Anchor point | N/A | PPE_006G23050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_010G00280 | 1 | ||
Tree-based ortholog | many-to-many | PPE_006G23050 PPE_010G00280 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29661G00200 | 1 | |
Anchor point | N/A | RC29661G00200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29661G00200 | 1 | ||
Tree-based ortholog | many-to-1 | RC29661G00200 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G064670 SL03G044000 | 2 | |
Anchor point | N/A | SL02G064670 SL02G092430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G044000 | 1 | ||
Tree-based ortholog | many-to-many | SL03G044000 SL02G064670 SL02G092430 | 3 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G011430 ST03G013870 | 2 | |
Anchor point | N/A | ST02G030930 ST02G011430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G013870 | 1 | ||
Tree-based ortholog | many-to-many | ST03G013870 ST02G011430 ST02G030930 | 3 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G12200 | 1 | |
Anchor point | N/A | TP2G29140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G29140 | 1 | ||
Tree-based ortholog | many-to-many | TP2G29140 TP5G12200 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G06920 TC0005G19450 | 2 | |
Anchor point | N/A | TC0001G06920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G19450 | 1 | ||
Tree-based ortholog | many-to-many | TC0001G06920 TC0005G19450 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV07G00090 VV07G00150 | 2 | |
Anchor point | N/A | VV07G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV07G00150 VV07G00090 | 2 | ||
Tree-based ortholog | many-to-many | VV07G00090 VV07G00150 VV14G07710 | 3 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G05470 ZM08G03340 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G03340 | 1 | ||
Tree-based ortholog | many-to-1 | ZM04G39220 | 1 |