Integrative Orthology Viewer: PT07G04240 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G33890 PT07G04240 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | PT07G04240 | 1 | ||
Tree-based ortholog | PT07G04240 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00049G01280 | 1 | |
Anchor point | N/A | ATR_00126G00390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00126G00390 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00126G00390 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G06460 AL7G03630 AL7G37230 | 3 | |
Anchor point | N/A | AL7G03630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G03630 | 1 | ||
Tree-based ortholog | 1-to-1 | AL7G03630 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G27390 AT4G37030 AT5G40640 | 3 | |
Anchor point | N/A | AT4G37030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G37030 | 1 | ||
Tree-based ortholog | 1-to-1 | AT4G37030 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV6G05010 BV6G24760 BV9G14290 | 3 | |
Anchor point | N/A | BV0G03650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G03650 | 1 | ||
Tree-based ortholog | 1-to-1 | BV0G03650 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G00830 BR02G32520 BR04G10020 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G18890 | 1 | ||
Tree-based ortholog | 1-to-1 | BR08G18890 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_005G05280 CRU_007G02980 CRU_007G33540 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G02980 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_007G02980 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00055G01640 CP00130G00570 | 2 | |
Anchor point | N/A | CP00055G01640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00055G01640 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00055G01640 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL00G04350 CL02G11210 CL09G19970 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G11210 | 1 | ||
Tree-based ortholog | 1-to-many | CL09G19970 CL00G04350 CL02G11210 | 3 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00006G02250 CS00368G00040 | 2 | |
Anchor point | N/A | CS00006G02250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00006G02250 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00006G02250 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00020G00050 CM00023G00890 CM00048G01430 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00020G00050 | 1 | ||
Tree-based ortholog | 1-to-many | CM00048G01430 CM00023G00890 CM00020G00050 | 3 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G11200 EG0009G14230 EG0010G19720 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0001G11180 EG0001G11200 | 2 | ||
Tree-based ortholog | 1-to-many | EG0010G19720 EG0009G14230 EG0001G11200 ... | 4 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G40480 FV1G18500 | 2 | |
Anchor point | N/A | FV1G18500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G18500 | 1 | ||
Tree-based ortholog | 1-to-1 | FV1G18500 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM16G07170 GM17G20190 GM19G07610 ... | 4 | |
Anchor point | N/A | GM17G20190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM17G20190 | 1 | ||
Tree-based ortholog | 1-to-1 | GM17G20190 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G22410 GR06G03680 GR12G09150 | 3 | |
Anchor point | N/A | GR07G21190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G21190 | 1 | ||
Tree-based ortholog | 1-to-1 | GR07G21190 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G245380 MD17G001340 | 2 | |
Anchor point | N/A | MD15G021810 MD02G015130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G021810 | 1 | ||
Tree-based ortholog | 1-to-many | MD00G072190 MD15G021810 MD02G015130 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00319G00010 ME03245G00250 ME06697G00450 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00319G00010 | 1 | ||
Tree-based ortholog | 1-to-1 | ME00319G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G082330 MT3G082410 MT6G022160 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT3G082330 MT3G082410 | 2 | ||
Tree-based ortholog | 1-to-many | MT7G031900 MT6G022160 MT3G082410 ... | 4 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G38430 OS04G37670 OS04G40700 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G37670 | 1 | ||
Tree-based ortholog | 1-to-1 | OS04G37670 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00014G02370 PP00047G01020 PP00072G00880 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00072G00880 PP00014G02370 PP00047G01020 | 3 | ||
Tree-based ortholog | 1-to-many | PP00072G00880 PP00014G02370 PP00047G01020 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_003G27380 PPE_003G27430 PPE_007G15670 | 3 | |
Anchor point | N/A | PPE_007G15670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G15670 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_007G15670 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29633G00260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29633G00260 | 1 | ||
Tree-based ortholog | 1-to-many | RC29633G00260 RC29676G00670 RC30005G00420 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G093630 SL07G045140 | 2 | |
Anchor point | N/A | SL02G090690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G090690 | 1 | ||
Tree-based ortholog | 1-to-1 | SL02G090690 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G036830 ST07G017650 | 2 | |
Anchor point | N/A | ST02G032140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G032150 | 1 | ||
Tree-based ortholog | 1-to-1 | ST02G032150 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G16580 TP7G01230 TP7G34730 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G34730 | 1 | ||
Tree-based ortholog | 1-to-1 | TP7G34730 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G05150 TC0004G02430 | 2 | |
Anchor point | N/A | TC0001G05150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G05150 | 1 | ||
Tree-based ortholog | 1-to-1 | TC0001G05150 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV07G05640 VV14G01490 | 2 | |
Anchor point | N/A | VV07G05640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G05640 | 1 | ||
Tree-based ortholog | 1-to-1 | VV07G05640 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G12040 ZM02G13840 ZM05G32860 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G13840 | 1 | ||
Tree-based ortholog | 1-to-1 | ZM02G13840 | 1 |