Integrative Orthology Viewer: PT07G04220 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT00G00420 PT00G17720 PT00G17730 ... | 23 | |
Best-Hits-and-Inparalogs(BHI)family | PT07G04220 | 1 | ||
Tree-based ortholog | PT07G04220 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00126G00150 ATR_00126G00180 ATR_00126G00190 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00126G00230 ATR_00126G00180 | 2 | ||
Tree-based ortholog | 1-to-1 | ATR_00126G00150 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G09140 AL4G09160 AL7G03660 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G03660 | 1 | ||
Tree-based ortholog | 1-to-many | AL7G03670 AL8G06480 AL4G04140 | 3 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G26560 AT4G37060 AT4G37070 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G37070 | 1 | ||
Tree-based ortholog | 1-to-many | AT4G37060 AT4G37070 AT5G43590 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV6G09020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G09020 | 1 | ||
Tree-based ortholog | 1-to-1 | BV6G09020 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G01710 BR01G01720 BR03G24260 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G55620 | 1 | ||
Tree-based ortholog | 1-to-many | BR01G01710 BR03G55610 BR01G01720 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_004G06610 CRU_005G08400 CRU_007G03010 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G03010 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_007G03010 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00055G01720 CP24415G00070 CP24415G00090 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00055G01720 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00055G01720 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL08G15300 CL08G15310 CL08G15320 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL08G15320 CL08G15310 | 2 | ||
Tree-based ortholog | 1-to-many | CL08G15310 CL08G15300 CL08G15320 | 3 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00006G02290 CS00006G02300 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS00006G02300 CS00006G02290 | 2 | ||
Tree-based ortholog | 1-to-many | CS00006G02290 CS00006G02300 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00014G02420 CM00014G02430 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G02430 | 1 | ||
Tree-based ortholog | 1-to-many | CM00014G02420 CM00014G02430 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G04180 EG0001G09650 EG0001G09950 ... | 26 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0009G07340 EG0009G07330 | 2 | ||
Tree-based ortholog | 1-to-many | EG0009G07340 EG0009G07330 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G12230 FV1G18580 FV2G34110 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G18580 | 1 | ||
Tree-based ortholog | 1-to-1 | FV1G18580 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM06G04130 GM14G08910 GM17G36240 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G04130 | 1 | ||
Tree-based ortholog | 1-to-1 | GM11G06070 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G10390 GR05G10420 GR07G05380 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G05380 | 1 | ||
Tree-based ortholog | 1-to-1 | GR07G05380 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G022830 LJ1G022910 LJ1G022940 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ1G022950 LJ1G022830 | 2 | ||
Tree-based ortholog | 1-to-many | LJ1G022950 LJ1G022830 LJ1G022940 ... | 4 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G038520 MD00G128050 MD00G175650 ... | 19 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G506360 MD00G502790 | 2 | ||
Tree-based ortholog | 1-to-many | MD02G015080 MD00G082020 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03104G00180 ME03104G00190 ME05162G00410 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03175G00110 | 1 | ||
Tree-based ortholog | 1-to-1 | ME03175G00110 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G019940 MT3G101400 MT3G101410 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G019940 | 1 | ||
Tree-based ortholog | 1-to-many | MT5G017680 MT5G017670 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS09G28770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G28770 | 1 | ||
Tree-based ortholog | 1-to-1 | OS09G28770 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00002G03290 PP00141G00700 PP00001G00440 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00198G00010 PP00141G00700 PP00002G03290 ... | 5 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G44400 PPE_001G44410 PPE_001G44420 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G15710 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_007G15710 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC30170G02630 RC30170G02650 RC30170G02660 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30115G00020 | 1 | ||
Tree-based ortholog | 1-to-1 | RC30115G00020 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G090630 SL04G079240 SL04G079250 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G079250 | 1 | ||
Tree-based ortholog | 1-to-1 | SL02G090630 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G032220 ST02G032240 ST04G032280 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G032430 | 1 | ||
Tree-based ortholog | 1-to-many | ST02G032240 ST02G032220 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G07910 TP7G34700 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G34700 | 1 | ||
Tree-based ortholog | 1-to-1 | TP7G34700 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G05090 TC0008G01140 TC0008G01150 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G05090 | 1 | ||
Tree-based ortholog | 1-to-1 | TC0001G05090 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV07G05690 VV07G05700 VV07G05710 ... | 14 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV18G07430 VV07G05700 VV07G05710 | 3 | ||
Tree-based ortholog | 1-to-many | VV07G05700 VV07G05710 VV07G05690 | 3 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G35310 ZM01G35320 ZM02G31820 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G44740 ZM02G44710 ZM02G44730 ... | 4 | ||
Tree-based ortholog | 1-to-1 | ZM02G31820 | 1 |