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Integrative Orthology Viewer:
PT06G16470
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT06G16470 | 1 |  |
| Anchor point | PT18G08750 PT00G05170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT00G05170 PT06G16470 | 2 | ||
| Tree-based ortholog | PT06G16470 PT00G05170 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00055G00030 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00056G01100 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G28320 | 1 | |
| Tree-based ortholog | many-to-many | AL3G23730 AL7G28320 AL3G23720 | 3 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G15450 | 1 | |
| Tree-based ortholog | many-to-many | AT3G21600 AT4G15450 AT3G21590 | 3 | ||
| Beta vulgaris | Anchor point | many-to-1 | BV8G05490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV8G05490 | 1 | ||
| Tree-based ortholog | many-to-1 | BV8G05490 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G22180 | 1 | |
| Tree-based ortholog | many-to-many | BR05G22180 BR01G20500 BR03G36800 | 3 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G25290 | 1 | |
| Tree-based ortholog | many-to-many | CRU_003G20680 CRU_007G25290 CRU_003G20670 | 3 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00040G00910 | 1 | |
| Tree-based ortholog | many-to-many | CP00006G02700 CP00037G01460 | 2 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR04G00700 | 1 | |
| Citrullus lanatus | Anchor point | many-to-1 | CL03G15800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G15800 | 1 | ||
| Tree-based ortholog | many-to-1 | CL03G15800 | 1 | ||
| Citrus sinensis | Anchor point | many-to-1 | CS00027G00570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00027G00570 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00027G00570 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00045G00950 | 1 | |
| Tree-based ortholog | many-to-many | CM00021G00660 CM00045G00950 | 2 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0003G08210 | 1 | |
| Tree-based ortholog | many-to-1 | EG0003G08210 | 1 | ||
| Fragaria vesca | Anchor point | many-to-1 | FV0G35590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G35590 | 1 | ||
| Tree-based ortholog | many-to-1 | FV0G35590 | 1 | ||
| Glycine max | Anchor point | many-to-many | GM08G03770 GM05G35850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM01G01150 GM16G08490 | 2 | ||
| Tree-based ortholog | many-to-many | GM16G08490 GM01G01150 GM08G03770 ... | 4 | ||
| Gossypium raimondii | Anchor point | many-to-1 | GR10G07700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR10G07700 | 1 | ||
| Tree-based ortholog | many-to-many | GR10G07700 GR04G28180 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G012500 | 1 | |
| Tree-based ortholog | many-to-many | LJ2G012500 LJ4G048500 | 2 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G097170 MD00G264020 MD00G007190 | 3 | |
| Tree-based ortholog | many-to-many | MD00G097170 MD00G264020 MD00G007190 | 3 | ||
| Manihot esculenta | Anchor point | many-to-1 | ME00847G00390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME00847G00390 | 1 | ||
| Tree-based ortholog | many-to-1 | ME00847G00390 | 1 | ||
| Medicago truncatula | Anchor point | many-to-many | MT6G088680 MT8G102510 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G102510 | 1 | ||
| Tree-based ortholog | many-to-many | MT6G088685 MT6G088680 MT8G102510 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G52480 | 1 | |
| Tree-based ortholog | many-to-1 | OS01G52480 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00025G01500 PP00001G00320 PP00002G01780 ... | 6 | |
| Tree-based ortholog | many-to-many | PP00002G01780 PP00001G00320 PP00025G01500 ... | 6 | ||
| Prunus persica | Anchor point | many-to-1 | PPE_007G23940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G23940 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_007G23940 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29912G01540 | 1 | |
| Tree-based ortholog | many-to-1 | RC29912G01540 | 1 | ||
| Solanum lycopersicum | Anchor point | many-to-1 | SL12G008460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL12G008460 | 1 | ||
| Tree-based ortholog | many-to-1 | SL12G008460 | 1 | ||
| Solanum tuberosum | Anchor point | many-to-1 | ST12G009620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST12G009620 | 1 | ||
| Tree-based ortholog | many-to-1 | ST12G009620 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G13670 | 1 | |
| Tree-based ortholog | many-to-many | TP3G19620 TP7G13670 | 2 | ||
| Theobroma cacao | Anchor point | many-to-1 | TC0009G09670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G09670 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0009G09670 | 1 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV11G04490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G04490 | 1 | ||
| Tree-based ortholog | many-to-1 | VV11G04490 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G26820 | 1 | |
| Tree-based ortholog | many-to-many | ZM02G11630 ZM02G26270 ZM08G26820 | 3 |