Integrative Orthology Viewer: PT06G15390 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT06G15390 PT18G07000 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | PT18G07000 PT06G15390 | 2 | ||
Tree-based ortholog | PT18G07000 PT06G15390 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00010G00460 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00010G00460 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G16580 AL6G25770 AL8G22300 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G22300 | 1 | ||
Tree-based ortholog | many-to-many | AL8G22300 AL2G20050 AL0G07940 ... | 5 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G70980 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G56680 | 1 | ||
Tree-based ortholog | many-to-many | AT5G56680 AT1G70980 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G07220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G07220 | 1 | ||
Tree-based ortholog | many-to-1 | BV3G07220 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G11970 BR10G09880 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G09880 | 1 | ||
Tree-based ortholog | many-to-many | BR10G09880 BR03G11970 BR10G10330 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_008G16740 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G16740 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_008G16740 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00078G00550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00078G00550 | 1 | ||
Tree-based ortholog | many-to-1 | CP00078G00550 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G11350 | 1 | |
Tree-based ortholog | many-to-1 | CR03G11350 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL03G16010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G16010 | 1 | ||
Tree-based ortholog | many-to-1 | CL03G16010 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00057G00200 | 1 | |
Anchor point | N/A | CS00106G00310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00106G00310 | 1 | ||
Tree-based ortholog | many-to-1 | CS00106G00310 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00025G01720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00025G01720 | 1 | ||
Tree-based ortholog | many-to-1 | CM00025G01720 | 1 | ||
Eucalyptus grandis | Anchor point | N/A | EG0003G07690 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0003G07690 | 1 | ||
Tree-based ortholog | many-to-1 | EG0003G07690 | 1 | ||
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G19770 | 1 | |
Tree-based ortholog | many-to-1 | FV3G19770 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G36140 GM08G03500 | 2 | |
Anchor point | N/A | GM08G03500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM08G03500 GM05G36140 | 2 | ||
Tree-based ortholog | many-to-many | GM09G16901 GM05G36140 GM08G03500 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR10G08040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR10G08040 | 1 | ||
Tree-based ortholog | many-to-1 | GR10G08040 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G022300 | 1 | |
Tree-based ortholog | many-to-1 | LJ4G022300 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G371160 MD03G021380 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD03G021380 | 1 | ||
Tree-based ortholog | many-to-many | MD00G371160 MD00G251660 MD03G021380 | 3 | ||
Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME09501G00130 | 1 | |
Tree-based ortholog | many-to-1 | ME09501G00130 | 1 | ||
Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G102050 | 1 | |
Tree-based ortholog | many-to-many | MT7G101050 MT8G102050 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G27520 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G27520 | 1 | ||
Tree-based ortholog | many-to-1 | OS01G27520 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL11G02040 | 1 | |
Tree-based ortholog | many-to-1 | OL11G02040 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00056G01000 PP00056G01040 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00056G01000 PP00056G01040 | 2 | ||
Tree-based ortholog | many-to-many | PP00056G01000 PP00056G01040 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_004G14740 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_004G14740 | 1 | ||
Tree-based ortholog | many-to-many | PPE_004G14740 PPE_007G08190 | 2 | ||
Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29912G01160 | 1 | |
Tree-based ortholog | many-to-1 | RC29912G01160 | 1 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G080710 | 1 | |
Tree-based ortholog | many-to-1 | SL10G080710 | 1 | ||
Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G022480 | 1 | |
Tree-based ortholog | many-to-1 | ST10G022480 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G18450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G18450 | 1 | ||
Tree-based ortholog | many-to-1 | TP6G18450 | 1 | ||
Theobroma cacao | Anchor point | N/A | TC0009G09050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G09050 | 1 | ||
Tree-based ortholog | many-to-1 | TC0009G09050 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV00G10480 | 1 | |
Anchor point | N/A | VV11G04050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G04050 | 1 | ||
Tree-based ortholog | many-to-many | VV16G01380 VV00G20880 VV06G10010 ... | 5 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM08G08390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G08390 | 1 | ||
Tree-based ortholog | many-to-1 | ZM08G08390 | 1 |