Integrative Orthology Viewer: PT06G09600 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT06G09600 PT16G11070 | 2 | |
Anchor point | PT16G11070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT06G09600 PT16G11070 | 2 | ||
Tree-based ortholog | PT06G09600 PT16G11070 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00018G01360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00018G01360 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00018G01360 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G09250 AL6G00830 AL6G28680 | 3 | |
Anchor point | 1-to-many | AL3G09250 AL6G00830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G09250 | 1 | ||
Tree-based ortholog | many-to-many | AL3G09250 AL6G28680 AL6G00830 | 3 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G09100 AT5G01290 AT5G28210 | 3 | |
Anchor point | 1-to-1 | AT3G09100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G09100 | 1 | ||
Tree-based ortholog | many-to-many | AT3G09100 AT5G28210 AT5G01290 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G47130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G47130 | 1 | ||
Tree-based ortholog | many-to-1 | BV0G47130 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G00350 BR05G32910 BR06G28060 | 3 | |
Anchor point | 1-to-many | BR03G00350 BR05G32910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G32910 | 1 | ||
Tree-based ortholog | many-to-many | BR05G32910 BR06G28060 BR03G00350 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G07900 CRU_006G00500 CRU_006G00520 ... | 4 | |
Anchor point | 1-to-many | CRU_006G00500 CRU_003G07900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G07900 | 1 | ||
Tree-based ortholog | many-to-many | CRU_003G07900 CRU_006G24850 CRU_006G00520 ... | 4 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00056G00910 | 1 | |
Anchor point | 1-to-1 | CP00056G00910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00056G00910 | 1 | ||
Tree-based ortholog | many-to-1 | CP00056G00910 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR00G01280 CR08G05190 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR00G01280 CR08G05190 | 2 | ||
Tree-based ortholog | many-to-many | CR07G01560 CR00G01280 CR08G05190 | 3 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G07250 | 1 | |
Anchor point | 1-to-1 | CL04G07250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL04G07250 | 1 | ||
Tree-based ortholog | many-to-1 | CL04G07250 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00640G00040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00640G00040 | 1 | ||
Tree-based ortholog | many-to-1 | CS00640G00040 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00002G01660 | 1 | |
Anchor point | 1-to-1 | CM00002G01660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00002G01660 | 1 | ||
Tree-based ortholog | many-to-1 | CM00002G01660 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G25240 | 1 | |
Anchor point | 1-to-1 | EG0011G25240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0011G25240 | 1 | ||
Tree-based ortholog | many-to-1 | EG0011G25240 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G25340 FV5G41070 FV6G11260 | 3 | |
Anchor point | 1-to-1 | FV6G11240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G11260 | 1 | ||
Tree-based ortholog | many-to-1 | FV6G11260 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G27240 GM03G14700 GM03G30870 ... | 6 | |
Anchor point | 1-to-many | GM18G42375 GM03G14700 GM07G17420 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM03G14700 GM01G27240 | 2 | ||
Tree-based ortholog | many-to-many | GM03G14700 GM01G27240 GM18G42375 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G26090 GR07G37800 GR10G05990 ... | 4 | |
Anchor point | 1-to-many | GR07G37800 GR12G11160 GR02G26090 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G11160 | 1 | ||
Tree-based ortholog | many-to-many | GR12G11160 GR02G26090 GR07G37800 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G022320 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G022320 | 1 | ||
Tree-based ortholog | many-to-1 | LJ3G022320 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G114280 MD00G429950 MD04G011830 | 3 | |
Anchor point | 1-to-1 | MD04G011830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD04G011830 | 1 | ||
Tree-based ortholog | many-to-1 | MD04G011830 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03651G00180 ME08270G00010 | 2 | |
Anchor point | 1-to-1 | ME03651G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03651G00180 | 1 | ||
Tree-based ortholog | many-to-many | ME08270G00010 ME03651G00180 ME08270G00020 | 3 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT4G014920 MT7G066810 | 2 | |
Anchor point | 1-to-many | MT4G014920 MT7G066810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G014920 | 1 | ||
Tree-based ortholog | many-to-many | MT4G014920 MT7G066810 MT7G068260 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS11G11070 OS12G09120 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS11G11070 OS12G09120 | 2 | ||
Tree-based ortholog | many-to-many | OS11G11070 OS12G09120 | 2 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL02G05410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL02G05410 | 1 | ||
Tree-based ortholog | many-to-many | OL04G04930 OL02G05410 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00014G01810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00014G01810 | 1 | ||
Tree-based ortholog | many-to-1 | PP00014G01810 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_006G27710 PPE_008G25670 | 2 | |
Anchor point | 1-to-1 | PPE_006G27710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G27710 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_006G27710 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC27798G00030 RC29647G01140 | 2 | |
Anchor point | 1-to-1 | RC27798G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC27798G00030 | 1 | ||
Tree-based ortholog | many-to-1 | RC27798G00030 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G011930 SL09G065010 SL11G040180 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G011930 | 1 | ||
Tree-based ortholog | many-to-many | SL09G065010 SL11G040180 SL09G011930 ... | 4 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST09G011920 ST11G019920 | 2 | |
Anchor point | 1-to-1 | ST09G011920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ST11G019920 ST09G011920 | 2 | ||
Tree-based ortholog | many-to-many | ST11G019920 ST09G011920 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G20230 TP3G07560 | 2 | |
Anchor point | 1-to-1 | TP3G07560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G07560 | 1 | ||
Tree-based ortholog | many-to-many | TP3G07560 TP2G20230 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G02220 TC0009G19830 | 2 | |
Anchor point | 1-to-1 | TC0005G02220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G02220 | 1 | ||
Tree-based ortholog | many-to-many | TC0009G19830 TC0005G02220 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G13350 | 1 | |
Anchor point | 1-to-1 | VV08G13350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G13350 | 1 | ||
Tree-based ortholog | many-to-1 | VV08G13350 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM04G03670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G03670 | 1 | ||
Tree-based ortholog | many-to-1 | ZM04G03670 | 1 |