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Integrative Orthology Viewer:
PT06G08310
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT04G20310 PT06G08310 PT09G16410 | 3 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT06G08310 | 1 | ||
| Tree-based ortholog | PT06G08310 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00031G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00031G00040 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00031G00040 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G21650 AL5G22660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G22660 | 1 | ||
| Tree-based ortholog | 1-to-many | AL4G21650 AL4G22620 AL0G01270 ... | 4 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G36250 AT3G52750 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G52750 | 1 | ||
| Tree-based ortholog | 1-to-many | AT2G36250 AT3G52750 | 2 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G12140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G12140 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV7G12140 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR04G21660 BR09G34130 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G21660 | 1 | ||
| Tree-based ortholog | 1-to-many | BR04G21660 BR09G34130 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_004G17420 CRU_005G18080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G18080 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_004G17420 CRU_005G18080 | 2 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00005G00250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00012G02340 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00005G00250 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G14060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G14060 | 1 | ||
| Tree-based ortholog | 1-to-many | CR02G11310 CR02G14060 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL04G09930 CL10G17080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G09930 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL04G09930 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00018G00010 CS00082G00240 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00018G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00018G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00011G03990 CM00068G00910 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00068G00910 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00068G00910 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G22530 EG0011G16830 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G16830 | 1 | ||
| Tree-based ortholog | 1-to-many | EG0001G22530 EG0011G16830 | 2 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G18280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G18280 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV6G18280 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G35290 GM10G08386 GM13G22070 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G35290 GM19G37940 | 2 | ||
| Tree-based ortholog | 1-to-many | GM13G22070 GM10G08386 GM19G37940 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G24040 GR04G00980 GR06G15530 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G15530 | 1 | ||
| Tree-based ortholog | 1-to-many | GR02G24040 GR06G15530 GR07G36840 | 3 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G066400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G066400 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G066400 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G159330 MD00G367920 MD00G451320 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G451320 MD01G004350 MD04G007010 ... | 4 | ||
| Tree-based ortholog | 1-to-many | MD04G007010 MD00G159330 MD00G367920 ... | 5 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01664G00080 ME06550G00730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06550G00730 | 1 | ||
| Tree-based ortholog | 1-to-many | ME06550G00730 ME01664G00080 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G060010 MT7G104500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G104500 | 1 | ||
| Tree-based ortholog | 1-to-many | MT1G060010 MT7G104500 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G44420 OS05G37160 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G44420 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS05G37160 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL07G01640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G01640 | 1 | ||
| Tree-based ortholog | 1-to-1 | OL07G01640 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00080G00350 PP00087G00810 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00080G00350 PP00087G00810 | 2 | ||
| Tree-based ortholog | 1-to-many | PP00087G00810 PP00080G00350 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_007G13330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G13330 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_007G13330 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29625G00300 RC30055G00230 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29625G00300 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29625G00300 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G009430 SL10G083490 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G009430 | 1 | ||
| Tree-based ortholog | 1-to-many | SL10G083490 SL09G009430 | 2 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST09G010750 ST10G025690 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G010750 | 1 | ||
| Tree-based ortholog | 1-to-many | ST10G025690 ST09G010750 | 2 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP4G18480 TP5G09580 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G18480 | 1 | ||
| Tree-based ortholog | 1-to-many | TP4G18480 TP5G09580 | 2 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0005G08530 TC0009G27910 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G08530 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0005G08530 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV08G11920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G11920 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV08G11920 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM10G26910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G26910 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM10G26910 | 1 |