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Integrative Orthology Viewer:
PT05G23030
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT02G03280 PT05G23030 | 2 |  |
| Anchor point | PT14G08970 PT17G14700 PT01G09950 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT05G23030 | 1 | ||
| Tree-based ortholog | PT05G23030 PT02G03280 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00027G01350 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00027G01350 | 1 | ||
| Arabidopsis lyrata | Anchor point | many-to-1 | AL2G01110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G00800 | 1 | ||
| Tree-based ortholog | many-to-many | AL3G05890 AL6G26800 | 2 | ||
| Arabidopsis thaliana | Anchor point | many-to-1 | AT1G63950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G01490 | 1 | ||
| Tree-based ortholog | many-to-many | AT3G05920 AT5G26690 | 2 | ||
| Beta vulgaris | Anchor point | many-to-many | BV6G16000 BV5G06950 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G16000 | 1 | ||
| Tree-based ortholog | many-to-1 | BV6G16000 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR02G36560 BR06G27200 | 2 | |
| Tree-based ortholog | many-to-many | BR02G33840 BR01G40510 BR02G36560 | 3 | ||
| Capsella rubella | Anchor point | many-to-1 | CRU_002G00930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G05100 | 1 | ||
| Tree-based ortholog | many-to-many | CRU_003G05100 CRU_006G23550 | 2 | ||
| Carica papaya | Anchor point | many-to-1 | CP00006G01600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00356G00010 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00006G01600 | 1 | ||
| Citrullus lanatus | Anchor point | many-to-many | CL01G02180 CL05G01530 CL01G19920 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G09320 | 1 | ||
| Tree-based ortholog | many-to-1 | CL01G19920 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00002G04560 | 1 | |
| Anchor point | many-to-1 | CS00002G04560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G04560 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00002G04560 | 1 | ||
| Cucumis melo | Anchor point | many-to-many | CM00006G01640 CM00005G06830 CM00007G08870 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G06850 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00007G08870 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G15270 | 1 | |
| Anchor point | many-to-many | EG0005G05730 EG0001G23080 EG0009G20330 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G15270 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0006G15270 | 1 | ||
| Fragaria vesca | Anchor point | many-to-1 | FV5G03570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G50500 | 1 | ||
| Tree-based ortholog | many-to-many | FV2G23110 FV2G23090 | 2 | ||
| Glycine max | Orthologous gene family | many-to-1 | GM17G37130 | 1 | |
| Anchor point | many-to-many | GM01G37675 GM08G02110 GM17G37130 ... | 11 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM17G37130 | 1 | ||
| Tree-based ortholog | many-to-1 | GM17G37130 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR09G19990 | 1 | |
| Anchor point | many-to-many | GR08G06580 GR09G19990 GR08G27410 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G19990 | 1 | ||
| Tree-based ortholog | many-to-1 | GR09G19990 | 1 | ||
| Lotus japonicus | Anchor point | many-to-1 | LJ4G046400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G004930 | 1 | ||
| Tree-based ortholog | many-to-1 | LJ2G030430 | 1 | ||
| Malus domestica | Anchor point | many-to-many | MD01G020810 MD15G018560 MD01G005830 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G099930 MD08G001700 | 2 | ||
| Tree-based ortholog | many-to-1 | MD15G018560 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME10524G00060 | 1 | |
| Anchor point | many-to-many | ME05280G00690 ME07520G01950 ME10524G00060 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10524G00060 | 1 | ||
| Tree-based ortholog | many-to-1 | ME10524G00060 | 1 | ||
| Medicago truncatula | Anchor point | many-to-many | MT5G020960 MT8G028615 MT1G099640 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G020960 | 1 | ||
| Tree-based ortholog | many-to-1 | MT5G020960 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-many | OS03G03500 OS10G38870 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G03500 | 1 | ||
| Tree-based ortholog | many-to-1 | OS04G56570 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00180G00680 PP00057G00120 PP00077G01150 ... | 4 | |
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G38350 | 1 | |
| Anchor point | many-to-many | PPE_002G28840 PPE_001G38350 PPE_005G11460 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G38350 | 1 | ||
| Tree-based ortholog | many-to-many | PPE_001G56560 PPE_001G38350 | 2 | ||
| Ricinus communis | Anchor point | many-to-1 | RC30190G04390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G04330 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30099G00570 | 1 | ||
| Solanum lycopersicum | Anchor point | many-to-1 | SL10G011960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G007870 | 1 | ||
| Tree-based ortholog | many-to-1 | SL03G025800 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G016730 | 1 | |
| Tree-based ortholog | many-to-1 | ST03G014330 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G00820 | 1 | |
| Tree-based ortholog | many-to-many | TP3G04810 TP2G21330 | 2 | ||
| Theobroma cacao | Anchor point | many-to-many | TC0003G28150 TC0001G35030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G03050 | 1 | ||
| Tree-based ortholog | many-to-many | TC0003G17820 TC0003G27230 | 2 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV02G03640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G14870 | 1 | ||
| Tree-based ortholog | many-to-1 | VV14G14870 | 1 | ||
| Zea mays | Anchor point | many-to-many | ZM01G01810 ZM01G19790 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G19790 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM10G25610 | 1 |