Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT05G21950
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT02G04350 PT05G21950 | 2 |  |
| Anchor point | PT05G05530 PT02G04350 PT13G04260 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT02G04350 PT05G21950 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G04850 | 1 | |
| Anchor point | many-to-1 | ATR_00002G04850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00002G04850 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G15230 | 1 | |
| Anchor point | many-to-1 | AL4G15230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G15230 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G30590 | 1 | |
| Anchor point | many-to-1 | AT2G30590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G30590 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV5G13140 | 1 | |
| Anchor point | many-to-1 | BV5G13140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G13140 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G15410 BR05G13170 | 2 | |
| Anchor point | many-to-1 | BR05G13170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G15410 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G11430 | 1 | |
| Anchor point | many-to-1 | CRU_004G11430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G11430 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00052G01370 | 1 | |
| Anchor point | many-to-1 | CP00052G01370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00052G01370 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR04G04800 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL09G07140 | 1 | |
| Anchor point | many-to-1 | CL07G02330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL09G07140 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00022G00340 | 1 | |
| Anchor point | many-to-1 | CS00022G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00022G00340 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00022G01110 CM00026G00940 | 2 | |
| Anchor point | many-to-1 | CM00022G01110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00022G01110 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G12410 | 1 | |
| Anchor point | many-to-1 | EG0002G12410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G12410 | 1 | ||
| Fragaria vesca | Anchor point | many-to-1 | FV0G25740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G25740 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G15920 GM10G03820 | 2 | |
| Anchor point | many-to-many | GM10G03820 GM03G31630 GM02G15920 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM10G03820 GM02G15920 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G21930 GR07G14280 GR13G10450 | 3 | |
| Anchor point | many-to-many | GR07G27840 GR13G10450 GR04G21930 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G14280 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G019760 | 1 | |
| Anchor point | many-to-1 | LJ5G019760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G019760 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD05G013270 MD10G015310 | 2 | |
| Anchor point | many-to-1 | MD10G015310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD10G015310 MD05G013270 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02906G00290 ME11998G00110 | 2 | |
| Anchor point | many-to-many | ME11998G00110 ME03614G03270 ME02906G00290 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02906G00290 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT1G070455 | 1 | |
| Anchor point | many-to-1 | MT1G070455 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G070455 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS12G40570 | 1 | |
| Anchor point | many-to-many | OS12G40570 OS03G58420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G53050 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00007G00090 PP00065G01210 PP00163G00570 ... | 4 | |
| Prunus persica | Orthologous gene family | many-to-1 | PPE_008G24480 | 1 | |
| Anchor point | many-to-many | PPE_006G34910 PPE_008G24480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G24480 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29883G00620 | 1 | |
| Anchor point | many-to-many | RC29598G00040 RC29883G00620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29883G00620 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G008610 SL09G066010 | 2 | |
| Anchor point | many-to-1 | SL09G066010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G008610 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST06G008450 ST09G019120 | 2 | |
| Anchor point | many-to-1 | ST09G019120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G019120 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G13140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G13140 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G26390 | 1 | |
| Anchor point | many-to-many | TC0001G26390 TC0005G27950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G26390 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV07G01730 | 1 | |
| Anchor point | many-to-many | VV07G01730 VV14G14860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G01730 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G28660 ZM03G15900 | 2 | |
| Anchor point | many-to-many | ZM01G47010 ZM01G56290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G07660 ZM03G15900 ZM01G47010 | 3 |