Integrative Orthology Viewer: PT05G00500 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT05G00500 PT05G00530 PT13G00450 ... | 4 | |
Anchor point | PT13G00450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT13G00450 PT05G00500 | 2 | ||
Tree-based ortholog | PT13G00450 PT05G00500 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00039G01130 ATR_00682G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00682G00010 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00682G00010 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G32380 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G33160 | 1 | ||
Tree-based ortholog | many-to-1 | AL6G33160 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT4G10670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G10710 | 1 | ||
Tree-based ortholog | many-to-1 | AT4G10710 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G08850 | 1 | |
Anchor point | 1-to-1 | BV4G08850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G08850 | 1 | ||
Tree-based ortholog | many-to-1 | BV4G08850 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR08G10550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G25670 | 1 | ||
Tree-based ortholog | many-to-many | BR08G10550 BR03G25670 | 2 | ||
Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G28430 | 1 | |
Tree-based ortholog | many-to-1 | CRU_006G28430 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00048G02060 | 1 | |
Anchor point | 1-to-1 | CP00048G02060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00048G02060 | 1 | ||
Tree-based ortholog | many-to-1 | CP00048G02060 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G17380 | 1 | |
Tree-based ortholog | many-to-1 | CR12G17380 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G25110 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G25110 | 1 | ||
Tree-based ortholog | many-to-1 | CL01G25110 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00388G00060 CS00388G00070 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00388G00070 | 1 | ||
Tree-based ortholog | many-to-1 | CS00388G00070 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00007G01030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00007G01030 | 1 | ||
Tree-based ortholog | many-to-1 | CM00007G01030 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G14050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0010G14050 | 1 | ||
Tree-based ortholog | many-to-1 | EG0010G14050 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G26530 FV6G03890 | 2 | |
Anchor point | 1-to-1 | FV6G03890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G26530 | 1 | ||
Tree-based ortholog | many-to-1 | FV6G03890 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM11G33140 GM11G33150 GM18G05080 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM18G05090 GM11G33150 GM18G05080 ... | 4 | ||
Tree-based ortholog | many-to-many | GM11G33140 GM18G05090 GM18G05080 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR07G30860 GR13G20920 GR13G20930 | 3 | |
Anchor point | 1-to-1 | GR07G30860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR13G20930 | 1 | ||
Tree-based ortholog | many-to-many | GR13G20930 GR07G30860 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD04G015330 MD04G015340 MD12G020700 ... | 4 | |
Anchor point | 1-to-many | MD04G015330 MD12G020700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD04G015330 MD12G020700 | 2 | ||
Tree-based ortholog | many-to-many | MD04G015330 MD12G020700 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME05875G01650 ME05875G01660 ME10305G00650 | 3 | |
Anchor point | 1-to-1 | ME10305G00650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME05875G01660 ME05875G01650 | 2 | ||
Tree-based ortholog | many-to-many | ME05875G01660 ME05875G01650 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G064470 MT6G009500 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT3G064470 MT6G009500 | 2 | ||
Tree-based ortholog | many-to-many | MT6G009500 MT3G064470 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G25550 OS12G26030 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G25550 | 1 | ||
Tree-based ortholog | many-to-many | OS08G31240 OS04G25550 | 2 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL12G02120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G02120 | 1 | ||
Tree-based ortholog | many-to-1 | OL12G02120 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00374G00170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00374G00170 | 1 | ||
Tree-based ortholog | many-to-1 | PP00374G00170 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_006G31220 PPE_006G31230 | 2 | |
Anchor point | 1-to-1 | PPE_006G31220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G31220 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_006G31220 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29884G00060 RC30128G03530 | 2 | |
Anchor point | 1-to-1 | RC30128G03530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29884G00060 | 1 | ||
Tree-based ortholog | many-to-1 | RC29884G00060 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G101020 SL01G101030 SL10G006770 | 3 | |
Anchor point | 1-to-1 | SL01G101020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G101020 | 1 | ||
Tree-based ortholog | many-to-1 | SL01G101020 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G038820 ST01G038830 ST10G006980 | 3 | |
Anchor point | 1-to-1 | ST01G038820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G038820 | 1 | ||
Tree-based ortholog | many-to-1 | ST01G038820 | 1 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G06780 | 1 | |
Tree-based ortholog | many-to-1 | TP6G06780 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G32490 TC0005G32500 | 2 | |
Anchor point | 1-to-1 | TC0005G32490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G32500 | 1 | ||
Tree-based ortholog | many-to-1 | TC0005G32500 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV14G10140 VV14G10150 | 2 | |
Anchor point | 1-to-1 | VV14G10150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G10150 | 1 | ||
Tree-based ortholog | many-to-1 | VV14G10150 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM05G17360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G17360 | 1 | ||
Tree-based ortholog | many-to-1 | ZM05G17360 | 1 |