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Integrative Orthology Viewer:
PT04G22720
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT03G00340 PT04G22720 PT19G07280 | 3 |  |
| Anchor point | PT03G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT03G00340 PT04G22720 | 2 | ||
| Tree-based ortholog | PT03G00340 PT04G22720 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00099G00330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00099G00330 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00099G00330 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G34910 AL8G13770 | 2 | |
| Anchor point | 1-to-1 | AL8G13770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G13770 | 1 | ||
| Tree-based ortholog | many-to-1 | AL8G13770 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G33700 AT5G49900 | 2 | |
| Anchor point | 1-to-many | AT1G33700 AT5G49900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G49900 | 1 | ||
| Tree-based ortholog | many-to-1 | AT5G49900 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV6G25030 | 1 | |
| Anchor point | 1-to-1 | BV6G25020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G25030 | 1 | ||
| Tree-based ortholog | many-to-1 | BV6G25030 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G24460 BR09G25940 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G24460 | 1 | ||
| Tree-based ortholog | many-to-1 | BR03G24460 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G30390 CRU_008G09590 | 2 | |
| Anchor point | 1-to-many | CRU_008G09590 CRU_001G30390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G09590 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_008G09590 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00059G01220 | 1 | |
| Anchor point | 1-to-1 | CP00113G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00021G00790 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00021G00790 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G18410 | 1 | |
| Anchor point | 1-to-1 | CL11G18410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G18410 | 1 | ||
| Tree-based ortholog | many-to-1 | CL11G18410 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00519G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00519G00030 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00519G00030 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00051G02230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00051G02230 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00051G02230 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G24970 EG0009G23570 | 2 | |
| Anchor point | 1-to-1 | EG0009G23570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G23570 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0009G23570 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G34650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G34650 | 1 | ||
| Tree-based ortholog | many-to-1 | FV5G34650 | 1 | ||
| Glycine max | Anchor point | 1-to-1 | GM07G40310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM07G40310 | 1 | ||
| Tree-based ortholog | many-to-1 | GM07G40310 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR08G04670 | 1 | |
| Anchor point | 1-to-1 | GR08G04670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G04670 | 1 | ||
| Tree-based ortholog | many-to-1 | GR08G04670 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G017180 | 1 | |
| Tree-based ortholog | many-to-1 | LJ5G017180 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G327220 | 1 | |
| Anchor point | 1-to-1 | MD08G022680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G184320 | 1 | ||
| Tree-based ortholog | many-to-many | MD00G423040 MD00G184320 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02421G00370 ME02421G00380 ME02538G00510 ... | 4 | |
| Anchor point | 1-to-1 | ME02538G00510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02538G00510 | 1 | ||
| Tree-based ortholog | many-to-1 | ME02538G00510 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT4G134760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G134760 | 1 | ||
| Tree-based ortholog | many-to-1 | MT4G134760 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS07G26210 OS11G13810 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G13810 | 1 | ||
| Tree-based ortholog | many-to-1 | OS11G13810 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00040G00960 PP00134G00180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00134G00180 PP00040G00960 | 2 | ||
| Tree-based ortholog | many-to-many | PP00134G00180 PP00040G00960 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G53390 | 1 | |
| Anchor point | 1-to-1 | PPE_001G53390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G53390 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_001G53390 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29685G00060 | 1 | |
| Anchor point | 1-to-1 | RC29685G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29685G00060 | 1 | ||
| Tree-based ortholog | many-to-1 | RC29685G00060 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G103230 SL11G042460 | 2 | |
| Anchor point | 1-to-1 | SL01G103230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G103230 | 1 | ||
| Tree-based ortholog | many-to-1 | SL01G103230 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G040210 ST11G019560 | 2 | |
| Anchor point | 1-to-1 | ST01G040210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G040210 | 1 | ||
| Tree-based ortholog | many-to-1 | ST01G040210 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G29070 TP6G11440 | 2 | |
| Anchor point | 1-to-1 | TP6G11440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G11440 | 1 | ||
| Tree-based ortholog | many-to-1 | TP6G11440 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G01340 | 1 | |
| Anchor point | 1-to-1 | TC0002G01340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G01340 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0002G01340 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV00G23240 VV05G09840 VV12G06870 | 3 | |
| Anchor point | 1-to-1 | VV12G06870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G06870 | 1 | ||
| Tree-based ortholog | many-to-1 | VV12G06870 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G42310 ZM04G03390 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G03390 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM04G03390 | 1 |