Integrative Orthology Viewer: PT04G20170 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT04G20170 PT09G16310 | 2 | |
Anchor point | PT09G16310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT09G16310 PT04G20170 | 2 | ||
Tree-based ortholog | PT09G16310 PT04G20170 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00020G00730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00020G00730 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00020G00730 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G12430 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G12430 | 1 | ||
Tree-based ortholog | many-to-1 | AL4G12430 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G27730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G27730 | 1 | ||
Tree-based ortholog | many-to-1 | AT2G27730 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV7G08490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV7G08490 | 1 | ||
Tree-based ortholog | many-to-1 | BV7G08490 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR07G12670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR07G12670 | 1 | ||
Tree-based ortholog | many-to-many | BR07G12670 BR04G15780 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G08270 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G08270 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_004G08270 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00032G00330 CP00032G00350 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00032G00330 | 1 | ||
Tree-based ortholog | many-to-1 | CP00032G00330 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G11930 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G11930 | 1 | ||
Tree-based ortholog | many-to-1 | CL01G11930 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00082G00390 | 1 | |
Anchor point | 1-to-1 | CS00082G00390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00082G00390 | 1 | ||
Tree-based ortholog | many-to-1 | CS00082G00390 | 1 | ||
Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00040G01370 | 1 | |
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G32280 | 1 | |
Anchor point | 1-to-1 | EG0002G32280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G32280 | 1 | ||
Tree-based ortholog | many-to-1 | EG0002G32280 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G43710 FV5G27760 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV2G43710 FV5G27760 | 2 | ||
Tree-based ortholog | many-to-many | FV2G43710 FV5G27760 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM11G18870 GM12G09600 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM12G09600 GM11G18870 | 2 | ||
Tree-based ortholog | many-to-many | GM12G09600 GM11G18870 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G01020 GR09G08470 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G01020 | 1 | ||
Tree-based ortholog | many-to-many | GR04G01020 GR09G08470 | 2 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G131080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G131080 | 1 | ||
Tree-based ortholog | many-to-1 | MD00G131080 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME02973G00210 | 1 | |
Anchor point | 1-to-1 | ME02973G00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02973G00210 | 1 | ||
Tree-based ortholog | many-to-1 | ME02973G00210 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G052910 | 1 | |
Anchor point | 1-to-1 | MT4G052910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G052910 | 1 | ||
Tree-based ortholog | many-to-1 | MT4G052910 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS09G39550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G39550 | 1 | ||
Tree-based ortholog | many-to-many | OS09G39550 OS08G44470 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00059G01660 PP00338G00260 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00338G00260 PP00059G01660 | 2 | ||
Tree-based ortholog | many-to-many | PP00338G00260 PP00059G01660 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G13110 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G13110 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_006G13110 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30055G00440 | 1 | |
Anchor point | 1-to-1 | RC30055G00440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30055G00440 | 1 | ||
Tree-based ortholog | many-to-1 | RC30055G00440 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL11G068510 | 1 | |
Anchor point | 1-to-1 | SL11G068510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G068510 | 1 | ||
Tree-based ortholog | many-to-1 | SL11G068510 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST11G025690 | 1 | |
Anchor point | 1-to-1 | ST11G025690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST11G025690 | 1 | ||
Tree-based ortholog | many-to-1 | ST11G025690 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G10520 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G10520 | 1 | ||
Tree-based ortholog | many-to-1 | TP4G10520 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G27670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G27670 | 1 | ||
Tree-based ortholog | many-to-1 | TC0009G27670 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV06G10000 | 1 | |
Anchor point | 1-to-1 | VV06G10000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G10000 | 1 | ||
Tree-based ortholog | many-to-1 | VV06G10000 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G29780 ZM08G33630 ZM10G10360 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM03G29780 ZM08G33630 | 2 | ||
Tree-based ortholog | many-to-1 | ZM05G29830 | 1 |