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Integrative Orthology Viewer:
PT03G20070
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT03G20070 | 1 |  |
| Anchor point | PT01G27750 PT01G02480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT03G20070 | 1 | ||
| Tree-based ortholog | PT01G02500 PT03G20070 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00097G00160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00060G01130 ATR_00060G01140 | 2 | ||
| Tree-based ortholog | many-to-many | ATR_00060G01140 ATR_00060G01130 ATR_00097G00160 | 3 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G12280 | 1 | |
| Tree-based ortholog | many-to-1 | AL6G12280 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G12380 | 1 | |
| Tree-based ortholog | many-to-1 | AT5G12380 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-many | BV2G16500 BV2G16510 BV2G16520 | 3 | |
| Anchor point | many-to-1 | BV2G16450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV2G16520 BV2G16500 BV2G16510 | 3 | ||
| Tree-based ortholog | many-to-many | BV2G16510 BV2G16500 BV2G16520 | 3 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G21580 | 1 | |
| Tree-based ortholog | many-to-1 | BR10G21580 | 1 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G10590 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_006G10590 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP36671G00010 | 1 | |
| Anchor point | many-to-1 | CP00197G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP36671G00010 | 1 | ||
| Tree-based ortholog | many-to-many | CP04842G00010 CP36671G00010 CP00197G00010 | 3 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL05G27620 CL05G27630 | 2 | |
| Anchor point | many-to-1 | CL05G27600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G27630 | 1 | ||
| Tree-based ortholog | many-to-many | CL05G27630 CL05G27620 | 2 | ||
| Citrus sinensis | Anchor point | many-to-1 | CS00003G05550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G01990 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00003G05550 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00016G08050 | 1 | |
| Anchor point | many-to-1 | CM00016G08030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G08050 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00016G08050 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0010G10530 EG0010G10540 | 2 | |
| Anchor point | many-to-many | EG0010G10530 EG0007G26080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0010G10540 EG0010G10530 | 2 | ||
| Tree-based ortholog | many-to-many | EG0010G10530 EG0010G10540 | 2 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G17250 | 1 | |
| Anchor point | many-to-1 | FV7G17250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G17250 | 1 | ||
| Tree-based ortholog | many-to-1 | FV7G17250 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G27100 GM11G21480 GM13G26960 ... | 4 | |
| Anchor point | many-to-many | GM15G38010 GM11G21457 GM13G26960 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G26960 GM15G38010 | 2 | ||
| Tree-based ortholog | many-to-many | GM11G21480 GM13G26960 GM15G38010 ... | 9 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR11G21290 | 1 | |
| Anchor point | many-to-1 | GR09G29580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G21290 | 1 | ||
| Tree-based ortholog | many-to-many | GR11G21290 GR11G21270 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G010230 | 1 | |
| Tree-based ortholog | many-to-1 | LJ1G071860 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G239340 MD00G299790 MD00G456310 ... | 5 | |
| Anchor point | many-to-1 | MD02G027340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G456310 MD00G239340 MD00G299790 ... | 5 | ||
| Tree-based ortholog | many-to-many | MD00G299790 MD07G002450 MD00G239340 ... | 7 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME08873G00070 | 1 | |
| Anchor point | many-to-many | ME05875G02880 ME08873G00050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08873G00070 | 1 | ||
| Tree-based ortholog | many-to-many | ME08873G00070 ME05875G02900 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT3G018780 MT8G038220 | 2 | |
| Anchor point | many-to-many | MT8G038090 MT3G018780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G038220 | 1 | ||
| Tree-based ortholog | many-to-many | MT3G018780 MT8G038220 MT8G038210 ... | 6 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G11800 | 1 | |
| Tree-based ortholog | many-to-1 | OS01G31270 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G03040 | 1 | |
| Tree-based ortholog | many-to-1 | OL11G03040 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00006G01290 PP00037G01320 PP00219G00010 ... | 4 | |
| Tree-based ortholog | many-to-many | PP00037G01320 PP00219G00010 PP00001G02760 ... | 7 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G01630 | 1 | |
| Anchor point | many-to-1 | PPE_002G01610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G01630 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_002G01630 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30131G03620 | 1 | |
| Anchor point | many-to-1 | RC30131G03620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30131G03620 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30131G03620 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL10G044690 SL10G047240 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G044690 | 1 | ||
| Tree-based ortholog | many-to-many | SL10G047240 SL10G044690 | 2 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST10G014100 ST10G015510 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G015510 | 1 | ||
| Tree-based ortholog | many-to-many | ST10G014100 ST10G015510 | 2 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G31260 | 1 | |
| Tree-based ortholog | many-to-1 | TP6G31260 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0010G16510 | 1 | |
| Anchor point | many-to-1 | TC0010G16510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G16510 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0010G16510 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G10680 | 1 | |
| Tree-based ortholog | many-to-1 | VV06G10680 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G40790 | 1 | |
| Tree-based ortholog | many-to-many | ZM03G04200 ZM08G03950 | 2 |