Integrative Orthology Viewer: PT03G19530 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G02840 PT03G19530 | 2 | |
Anchor point | PT01G02840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT03G19530 PT01G02840 | 2 | ||
Tree-based ortholog | PT01G02840 PT03G19530 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00019G01560 ATR_00063G00950 | 2 | |
Anchor point | 1-to-1 | ATR_00063G00950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00019G01560 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00063G00950 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G24450 | 1 | |
Anchor point | 1-to-1 | AL5G24450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G24450 | 1 | ||
Tree-based ortholog | many-to-1 | AL5G24450 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G54390 | 1 | |
Anchor point | 1-to-1 | AT3G54390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G54390 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G54390 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV2G16970 | 1 | |
Anchor point | 1-to-1 | BV2G16970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV2G16970 | 1 | ||
Tree-based ortholog | many-to-1 | BV2G16970 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR09G35370 | 1 | |
Anchor point | 1-to-1 | BR09G35370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G35370 | 1 | ||
Tree-based ortholog | many-to-1 | BR09G35370 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G19730 | 1 | |
Anchor point | 1-to-1 | CRU_005G19730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G19730 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_005G19730 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00403G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00403G00010 | 1 | ||
Tree-based ortholog | many-to-1 | CP00403G00010 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G27790 | 1 | |
Anchor point | 1-to-1 | CL05G27790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G27790 | 1 | ||
Tree-based ortholog | many-to-1 | CL05G27790 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00072G00070 | 1 | |
Anchor point | 1-to-1 | CS00072G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00072G00070 | 1 | ||
Tree-based ortholog | many-to-1 | CS00072G00070 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G08260 | 1 | |
Anchor point | 1-to-1 | CM00016G08260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00016G08260 | 1 | ||
Tree-based ortholog | many-to-1 | CM00016G08260 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G25900 | 1 | |
Anchor point | 1-to-1 | EG0007G25900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0007G25900 | 1 | ||
Tree-based ortholog | many-to-1 | EG0007G25900 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G16210 | 1 | |
Anchor point | 1-to-1 | FV7G16210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G16210 | 1 | ||
Tree-based ortholog | many-to-1 | FV7G16210 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G17330 GM11G25570 GM13G26550 ... | 4 | |
Anchor point | 1-to-many | GM15G37451 GM04G17330 GM13G26550 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM04G17330 GM15G37451 GM13G26550 ... | 4 | ||
Tree-based ortholog | many-to-many | GM11G25570 GM04G17330 GM13G26550 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR12G01840 | 1 | |
Anchor point | 1-to-many | GR11G21640 GR12G01840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G01840 | 1 | ||
Tree-based ortholog | many-to-many | GR12G01840 GR11G21640 | 2 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G036020 | 1 | |
Malus domestica | Orthologous gene family | many-to-many | MD00G420930 MD02G026840 MD07G003450 | 3 | |
Anchor point | 1-to-many | MD02G026840 MD07G003450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G420930 MD07G003450 | 2 | ||
Tree-based ortholog | many-to-many | MD00G420930 MD02G026840 MD07G003450 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME05875G02220 | 1 | |
Anchor point | 1-to-many | ME08873G00280 ME05875G02220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME05875G02220 | 1 | ||
Tree-based ortholog | many-to-many | ME05875G02220 ME08873G00280 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT3G014280 | 1 | |
Anchor point | 1-to-1 | MT3G014280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G014280 | 1 | ||
Tree-based ortholog | many-to-many | MT3G014280 MT1G037650 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS09G38570 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G38570 | 1 | ||
Tree-based ortholog | many-to-1 | OS09G38570 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00065G01130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00065G01130 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G02390 | 1 | |
Anchor point | 1-to-1 | PPE_002G02390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G02390 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_002G02390 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30131G03200 | 1 | |
Anchor point | 1-to-1 | RC30131G03200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30131G03200 | 1 | ||
Tree-based ortholog | many-to-1 | RC30131G03200 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G096470 | 1 | |
Anchor point | 1-to-1 | SL01G096470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G096470 | 1 | ||
Tree-based ortholog | many-to-1 | SL01G096470 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G033970 | 1 | |
Anchor point | 1-to-1 | ST01G033970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G033970 | 1 | ||
Tree-based ortholog | many-to-1 | ST01G033970 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G08020 | 1 | |
Anchor point | 1-to-1 | TP5G08020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G08020 | 1 | ||
Tree-based ortholog | many-to-1 | TP5G08020 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0010G14890 | 1 | |
Anchor point | 1-to-1 | TC0010G14890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0010G14890 | 1 | ||
Tree-based ortholog | many-to-1 | TC0010G14890 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV13G12750 | 1 | |
Anchor point | 1-to-1 | VV13G12750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G12750 | 1 | ||
Tree-based ortholog | many-to-1 | VV13G12750 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM07G21120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM07G21120 ZM02G34940 | 2 | ||
Tree-based ortholog | many-to-many | ZM02G34940 ZM07G21120 | 2 |