Integrative Orthology Viewer: PT03G08640 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G14810 PT03G08640 | 2 | |
Anchor point | PT01G14810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT03G08640 PT01G14810 | 2 | ||
Tree-based ortholog | PT03G08640 PT01G14810 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00071G01260 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00071G01260 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL8G01130 | 1 | |
Anchor point | 1-to-1 | AL8G01130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G01130 | 1 | ||
Tree-based ortholog | many-to-1 | AL8G01130 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G47010 | 1 | |
Anchor point | 1-to-1 | AT5G47010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G47010 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G47010 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G04370 | 1 | |
Anchor point | 1-to-1 | BV5G04370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G04370 | 1 | ||
Tree-based ortholog | many-to-1 | BV5G04370 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR02G29150 | 1 | |
Anchor point | 1-to-1 | BR02G29150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR02G29150 | 1 | ||
Tree-based ortholog | many-to-1 | BR02G29150 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_008G00830 | 1 | |
Anchor point | 1-to-1 | CRU_008G00830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G00830 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_008G00830 | 1 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00029G00020 | 1 | |
Tree-based ortholog | many-to-1 | CP00029G00020 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G04360 | 1 | |
Tree-based ortholog | many-to-1 | CR02G04360 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G00210 | 1 | |
Anchor point | 1-to-1 | CL10G00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G00210 | 1 | ||
Tree-based ortholog | many-to-1 | CL10G00210 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00850G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00850G00010 | 1 | ||
Tree-based ortholog | many-to-1 | CS00850G00010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00021G01900 | 1 | |
Anchor point | 1-to-1 | CM00021G01900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00021G01900 | 1 | ||
Tree-based ortholog | many-to-1 | CM00021G01900 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G02950 | 1 | |
Anchor point | 1-to-1 | EG0005G02950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0005G02950 | 1 | ||
Tree-based ortholog | many-to-1 | EG0005G02950 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G30970 | 1 | |
Anchor point | 1-to-1 | FV5G30970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G30970 | 1 | ||
Tree-based ortholog | many-to-1 | FV5G30970 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G41110 GM11G04310 | 2 | |
Anchor point | 1-to-many | GM01G41110 GM11G32931 GM11G04310 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM11G04310 GM01G41110 | 2 | ||
Tree-based ortholog | many-to-many | GM11G04310 GM01G41110 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR03G17950 GR04G18970 GR06G21530 | 3 | |
Anchor point | 1-to-many | GR06G21530 GR03G17950 GR04G18970 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G18970 | 1 | ||
Tree-based ortholog | many-to-many | GR06G21530 GR04G18970 GR03G17950 | 3 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G005130 | 1 | |
Tree-based ortholog | many-to-1 | LJ4G005130 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G038500 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD08G018160 MD01G002640 | 2 | ||
Tree-based ortholog | many-to-many | MD15G034380 MD00G440730 MD00G356420 ... | 6 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME01131G00040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME01131G00040 | 1 | ||
Tree-based ortholog | many-to-1 | ME01131G00040 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT5G013820 | 1 | |
Anchor point | 1-to-1 | MT5G013820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G013820 | 1 | ||
Tree-based ortholog | many-to-1 | MT5G013820 | 1 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS07G31340 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G31340 | 1 | ||
Tree-based ortholog | many-to-1 | OS07G31340 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL09G02610 | 1 | |
Tree-based ortholog | many-to-1 | OL09G02610 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00010G00570 PP00044G00700 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00010G00570 PP00044G00700 | 2 | ||
Tree-based ortholog | many-to-many | PP00044G00700 PP00010G00570 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G05250 | 1 | |
Anchor point | 1-to-1 | PPE_005G05250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G05250 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_005G05250 | 1 | ||
Ricinus communis | Anchor point | 1-to-1 | RC29628G00350 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29628G00350 | 1 | ||
Tree-based ortholog | many-to-1 | RC29628G00350 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL08G007110 SL08G077420 | 2 | |
Anchor point | 1-to-many | SL08G007110 SL08G077420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G007110 | 1 | ||
Tree-based ortholog | many-to-1 | SL08G077420 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST08G006100 ST08G006110 ST08G022900 | 3 | |
Anchor point | 1-to-many | ST08G022900 ST08G006100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST08G006110 | 1 | ||
Tree-based ortholog | many-to-1 | ST08G022900 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP2G11810 | 1 | |
Anchor point | 1-to-1 | TP2G11810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G11810 | 1 | ||
Tree-based ortholog | many-to-1 | TP2G11810 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G23380 | 1 | |
Anchor point | 1-to-1 | TC0003G23380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G23380 | 1 | ||
Tree-based ortholog | many-to-1 | TC0003G23380 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV02G02990 | 1 | |
Tree-based ortholog | many-to-1 | VV02G02990 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM02G35870 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G22380 | 1 | ||
Tree-based ortholog | many-to-many | ZM07G22380 ZM02G35860 | 2 |