Integrative Orthology Viewer: PT02G13880 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT02G13880 | 1 | |
Anchor point | PT14G04990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT02G13880 PT14G04990 | 2 | ||
Tree-based ortholog | PT02G13880 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00002G02250 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00002G02250 | 1 | ||
Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G31450 | 1 | |
Tree-based ortholog | 1-to-1 | AL6G31450 | 1 | ||
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G09320 | 1 | |
Tree-based ortholog | 1-to-1 | AT4G09320 | 1 | ||
Beta vulgaris | Anchor point | 1-to-1 | BV0G64100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G64100 | 1 | ||
Tree-based ortholog | 1-to-1 | BV0G64100 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G19340 | 1 | |
Tree-based ortholog | 1-to-many | BR08G00380 BR09G19340 | 2 | ||
Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G26880 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_006G26880 | 1 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00022G00500 | 1 | |
Tree-based ortholog | 1-to-1 | CP00022G00500 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR16G01940 | 1 | |
Tree-based ortholog | 1-to-many | CR07G03210 CR16G01940 | 2 | ||
Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G00120 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G00120 | 1 | ||
Citrus sinensis | Anchor point | 1-to-1 | CS00001G00560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00001G00560 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00001G00560 | 1 | ||
Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00006G00140 | 1 | |
Tree-based ortholog | 1-to-1 | CM00006G00140 | 1 | ||
Eucalyptus grandis | Anchor point | 1-to-1 | EG0004G09790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0004G09790 | 1 | ||
Tree-based ortholog | 1-to-many | EG0004G09790 EG0001G24990 | 2 | ||
Fragaria vesca | Anchor point | 1-to-1 | FV7G12700 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G12700 | 1 | ||
Tree-based ortholog | 1-to-1 | FV7G12700 | 1 | ||
Glycine max | Anchor point | 1-to-1 | GM03G25820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM07G13710 GM03G25820 | 2 | ||
Tree-based ortholog | 1-to-many | GM07G13710 GM03G25820 | 2 | ||
Gossypium raimondii | Anchor point | 1-to-1 | GR04G16660 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR04G16660 GR08G10940 | 2 | ||
Tree-based ortholog | 1-to-many | GR08G10940 GR04G16660 | 2 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G026290 | 1 | |
Tree-based ortholog | 1-to-1 | LJ4G026290 | 1 | ||
Malus domestica | Anchor point | 1-to-1 | MD07G008010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD07G008010 | 1 | ||
Tree-based ortholog | 1-to-1 | MD07G008010 | 1 | ||
Manihot esculenta | Anchor point | 1-to-1 | ME08265G04260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME08265G04260 | 1 | ||
Tree-based ortholog | 1-to-1 | ME08265G04260 | 1 | ||
Medicago truncatula | Anchor point | 1-to-1 | MT8G007235 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G007235 | 1 | ||
Tree-based ortholog | 1-to-1 | MT8G007235 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS10G41410 | 1 | |
Tree-based ortholog | 1-to-1 | OS10G41410 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL14G00050 | 1 | |
Tree-based ortholog | 1-to-1 | OL14G00050 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00165G00050 PP00165G00090 PP00165G00060 | 3 | |
Tree-based ortholog | 1-to-many | PP00165G00050 PP00165G00060 PP00165G00090 | 3 | ||
Prunus persica | Anchor point | 1-to-1 | PPE_002G13050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G13050 | 1 | ||
Tree-based ortholog | 1-to-many | PPE_001G33630 PPE_002G13050 | 2 | ||
Ricinus communis | Anchor point | 1-to-1 | RC29709G00060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29709G00060 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29709G00060 | 1 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL01G089970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G089970 | 1 | ||
Tree-based ortholog | 1-to-1 | SL01G089970 | 1 | ||
Solanum tuberosum | Anchor point | 1-to-1 | ST01G029210 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G029210 | 1 | ||
Tree-based ortholog | 1-to-1 | ST01G029210 | 1 | ||
Thellungiella parvula | Anchor point | 1-to-1 | TP1G00140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G00010 | 1 | ||
Tree-based ortholog | 1-to-many | TP6G00010 TP1G00140 | 2 | ||
Theobroma cacao | Anchor point | 1-to-1 | TC0001G39160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G39160 | 1 | ||
Tree-based ortholog | 1-to-many | TC0001G39160 TC0003G14830 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV15G01300 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G01300 | 1 | ||
Tree-based ortholog | 1-to-1 | VV15G01300 | 1 | ||
Zea mays | Anchor point | 1-to-1 | ZM01G21610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G21610 | 1 | ||
Tree-based ortholog | 1-to-1 | ZM01G21610 | 1 |