Integrative Orthology Viewer: PT02G06900 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT02G06900 PT05G19140 | 2 | |
Anchor point | PT05G19140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT02G06900 | 1 | ||
Tree-based ortholog | PT02G06900 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00030G00200 | 1 | |
Anchor point | 1-to-1 | ATR_00030G00200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00030G00200 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00030G00200 | 1 | ||
Arabidopsis lyrata | Anchor point | 1-to-1 | AL1G38880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G38880 | 1 | ||
Tree-based ortholog | 1-to-1 | AL1G38880 | 1 | ||
Arabidopsis thaliana | Anchor point | 1-to-1 | AT1G43670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G43670 | 1 | ||
Tree-based ortholog | 1-to-1 | AT1G43670 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV1G12600 | 1 | |
Anchor point | 1-to-1 | BV1G12600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G12600 | 1 | ||
Tree-based ortholog | 1-to-1 | BV1G12600 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR05G11110 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G05350 | 1 | ||
Tree-based ortholog | 1-to-many | BR05G11110 BR08G05350 | 2 | ||
Capsella rubella | Anchor point | 1-to-1 | CRU_001G32970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G32970 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_001G32970 | 1 | ||
Carica papaya | Anchor point | 1-to-1 | CP00021G01890 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00021G01890 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00021G01890 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G03270 | 1 | |
Tree-based ortholog | 1-to-1 | CR12G03270 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G05090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G05090 | 1 | ||
Tree-based ortholog | 1-to-1 | CL08G05090 | 1 | ||
Citrus sinensis | Anchor point | 1-to-1 | CS00002G00840 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G00840 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00002G00840 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00015G01880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00015G01880 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00015G01880 | 1 | ||
Eucalyptus grandis | Anchor point | 1-to-1 | EG0006G22420 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G22420 | 1 | ||
Tree-based ortholog | 1-to-1 | EG0006G22420 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G22120 | 1 | |
Anchor point | 1-to-1 | FV2G22120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G22120 | 1 | ||
Tree-based ortholog | 1-to-1 | FV2G22120 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G19430 GM16G28310 | 2 | |
Anchor point | 1-to-many | GM15G05560 GM20G30620 GM16G28310 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G30620 GM10G36990 | 2 | ||
Tree-based ortholog | 1-to-many | GM10G36990 GM20G30620 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G05540 GR05G08030 GR12G15940 | 3 | |
Anchor point | 1-to-1 | GR05G08030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G05540 | 1 | ||
Tree-based ortholog | 1-to-many | GR05G08030 GR02G05540 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G029410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G029410 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ6G029410 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G321130 | 1 | |
Anchor point | 1-to-1 | MD15G034960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G321130 | 1 | ||
Tree-based ortholog | 1-to-many | MD00G321130 MD00G133790 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME05230G00040 | 1 | |
Anchor point | 1-to-many | ME07519G00770 ME05230G00040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05230G00040 | 1 | ||
Tree-based ortholog | 1-to-1 | ME05230G00040 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G008030 MT6G035305 | 2 | |
Anchor point | 1-to-many | MT2G008030 MT6G035305 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G035305 | 1 | ||
Tree-based ortholog | 1-to-1 | MT6G035305 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G64660 OS05G36270 | 2 | |
Anchor point | 1-to-many | OS05G36270 OS01G64660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G36270 | 1 | ||
Tree-based ortholog | 1-to-many | OS05G36270 OS01G64660 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G00280 | 1 | |
Tree-based ortholog | 1-to-1 | OL09G00110 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G01250 PP00385G00140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00001G01250 PP00385G00140 | 2 | ||
Tree-based ortholog | 1-to-many | PP00385G00140 PP00001G01250 | 2 | ||
Prunus persica | Anchor point | 1-to-many | PPE_001G55450 PPE_008G02980 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G02980 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_008G02980 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29576G00070 | 1 | |
Anchor point | 1-to-1 | RC29576G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29576G00070 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29576G00070 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G071340 | 1 | |
Anchor point | 1-to-many | SL04G071340 SL12G056530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G056530 | 1 | ||
Tree-based ortholog | 1-to-many | SL04G071340 SL12G056530 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST04G023520 | 1 | |
Anchor point | 1-to-many | ST04G023520 ST12G024820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G024820 | 1 | ||
Tree-based ortholog | 1-to-many | ST04G023520 ST12G024820 | 2 | ||
Thellungiella parvula | Anchor point | 1-to-1 | TP1G32670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G32670 | 1 | ||
Tree-based ortholog | 1-to-1 | TP1G32670 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G04180 | 1 | |
Anchor point | 1-to-1 | TC0002G04180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G14540 | 1 | ||
Tree-based ortholog | 1-to-1 | TC0008G14540 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV18G15440 | 1 | |
Anchor point | 1-to-1 | VV18G15440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G15440 | 1 | ||
Tree-based ortholog | 1-to-1 | VV18G15440 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM03G25910 | 1 | |
Anchor point | 1-to-1 | ZM03G25910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G25910 | 1 | ||
Tree-based ortholog | 1-to-many | ZM08G15070 ZM03G25910 | 2 |