Integrative Orthology Viewer: PT02G04360 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT02G04360 PT05G21940 | 2 | |
Anchor point | PT05G21940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT02G04360 PT05G21940 | 2 | ||
Tree-based ortholog | PT02G04360 PT05G21940 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G04860 | 1 | |
Anchor point | 1-to-1 | ATR_00002G04860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00002G04860 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00002G04860 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G18020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G18020 | 1 | ||
Tree-based ortholog | many-to-1 | AL5G18020 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G49100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G49100 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G49100 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G63730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G63730 | 1 | ||
Tree-based ortholog | many-to-1 | BV0G63730 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR06G16510 BR06G19520 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR06G16510 | 1 | ||
Tree-based ortholog | many-to-many | BR06G19520 BR06G16510 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G14360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G14360 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_005G14360 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00052G01360 | 1 | |
Anchor point | 1-to-1 | CP00052G01360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00052G01360 | 1 | ||
Tree-based ortholog | many-to-1 | CP00052G01360 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G15900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G15900 | 1 | ||
Tree-based ortholog | many-to-1 | CR12G15900 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G02340 | 1 | |
Anchor point | 1-to-1 | CL07G02340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL07G02340 | 1 | ||
Tree-based ortholog | many-to-1 | CL07G02340 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00022G00350 | 1 | |
Anchor point | 1-to-1 | CS00022G00350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00022G00350 | 1 | ||
Tree-based ortholog | many-to-1 | CS00022G00350 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00022G01120 | 1 | |
Anchor point | 1-to-1 | CM00022G01120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00022G01120 | 1 | ||
Tree-based ortholog | many-to-1 | CM00022G01120 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G12400 | 1 | |
Anchor point | 1-to-1 | EG0002G12400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G12400 | 1 | ||
Tree-based ortholog | many-to-1 | EG0002G12400 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G08260 | 1 | |
Anchor point | 1-to-1 | FV2G08260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G08260 | 1 | ||
Tree-based ortholog | many-to-1 | FV2G08260 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G46000 GM10G03810 GM18G31665 | 3 | |
Anchor point | 1-to-many | GM02G15930 GM10G03810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM18G31665 GM08G46000 | 2 | ||
Tree-based ortholog | many-to-1 | GM02G15930 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G21920 GR07G14270 | 2 | |
Anchor point | 1-to-many | GR04G21920 GR07G14270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G21920 | 1 | ||
Tree-based ortholog | many-to-many | GR04G21920 GR07G14270 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G019740 | 1 | |
Anchor point | 1-to-1 | LJ5G019740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G019740 | 1 | ||
Tree-based ortholog | many-to-1 | LJ5G019740 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G069690 MD10G015320 | 2 | |
Anchor point | 1-to-1 | MD10G015320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G069690 MD10G015320 | 2 | ||
Tree-based ortholog | many-to-many | MD10G015320 MD00G069690 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME11998G00120 | 1 | |
Anchor point | 1-to-1 | ME11998G00120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME11998G00120 | 1 | ||
Tree-based ortholog | many-to-1 | ME11998G00120 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G070460 | 1 | |
Anchor point | 1-to-1 | MT1G070460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G070460 | 1 | ||
Tree-based ortholog | many-to-1 | MT1G070460 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G14550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G14550 | 1 | ||
Tree-based ortholog | many-to-1 | OS06G14550 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00079G01170 PP00243G00280 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00243G00280 PP00079G01170 | 2 | ||
Tree-based ortholog | many-to-many | PP00243G00280 PP00079G01170 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_008G24490 | 1 | |
Anchor point | 1-to-1 | PPE_008G24490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G24490 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_008G24490 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29883G00610 RC29883G00760 | 2 | |
Anchor point | 1-to-1 | RC29883G00610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | RC29883G00610 RC29883G00760 | 2 | ||
Tree-based ortholog | many-to-many | RC29883G00760 RC29883G00610 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL12G099820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL12G099820 | 1 | ||
Tree-based ortholog | many-to-1 | SL12G099820 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST12G031790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST12G031790 | 1 | ||
Tree-based ortholog | many-to-1 | ST12G031790 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G12980 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G12980 | 1 | ||
Tree-based ortholog | many-to-1 | TP5G12980 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G26420 | 1 | |
Anchor point | 1-to-1 | TC0001G26420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G26420 | 1 | ||
Tree-based ortholog | many-to-1 | TC0001G26420 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV07G01720 | 1 | |
Anchor point | 1-to-1 | VV07G01720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G01720 | 1 | ||
Tree-based ortholog | many-to-1 | VV07G01720 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G18250 ZM09G07280 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM06G18250 ZM09G07280 | 2 | ||
Tree-based ortholog | many-to-many | ZM10G27090 ZM09G07280 ZM06G18250 | 3 |