Integrative Orthology Viewer: PT02G02180 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G10460 PT01G10610 PT01G24690 ... | 16 | |
Anchor point | PT05G23990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT02G02180 | 1 | ||
Tree-based ortholog | PT02G02180 PT05G23990 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00009G02590 ATR_00009G02800 ATR_00029G02560 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00032G00350 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00068G00440 ATR_00033G00510 ATR_00010G03790 ... | 7 | ||
Arabidopsis lyrata | Anchor point | 1-to-many | AL2G24690 AL1G21050 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G21050 | 1 | ||
Tree-based ortholog | many-to-1 | AL1G21050 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G20010 AT1G75780 AT2G29550 ... | 8 | |
Anchor point | 1-to-many | AT1G20010 AT1G75780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G20010 | 1 | ||
Tree-based ortholog | many-to-1 | AT1G20010 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G62030 BV5G07470 BV7G05690 | 3 | |
Anchor point | 1-to-many | BV0G62030 BV5G07470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G62030 | 1 | ||
Tree-based ortholog | many-to-1 | BV0G62030 | 1 | ||
Brassica rapa | Anchor point | 1-to-many | BR09G19680 BR07G31030 BR01G11260 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G31030 | 1 | ||
Tree-based ortholog | many-to-1 | BR07G31030 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G18720 CRU_002G21340 CRU_004G10320 ... | 8 | |
Anchor point | 1-to-many | CRU_002G21340 CRU_001G18720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G21340 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_002G21340 | 1 | ||
Carica papaya | Anchor point | 1-to-1 | CP00026G00500 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00056G00740 | 1 | ||
Tree-based ortholog | many-to-many | CP00092G00750 CP00074G00450 CP00119G00500 ... | 8 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR12G16830 CR12G15170 | 2 | |
Tree-based ortholog | many-to-many | CR03G10780 CR04G00210 CR06G13080 ... | 6 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G02540 CL03G07950 CL04G07290 ... | 6 | |
Anchor point | 1-to-many | CL08G14020 CL04G10540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G14020 | 1 | ||
Tree-based ortholog | many-to-1 | CL08G14020 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00009G00910 CS00010G00180 CS00026G00550 ... | 5 | |
Anchor point | 1-to-1 | CS00002G05560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00010G00180 | 1 | ||
Tree-based ortholog | many-to-many | CS00002G05560 CS00123G00130 CS00117G00220 ... | 9 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00001G02250 CM00001G09620 CM00005G06460 ... | 5 | |
Anchor point | 1-to-1 | CM00014G03790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G09620 | 1 | ||
Tree-based ortholog | many-to-1 | CM00014G03790 | 1 | ||
Eucalyptus grandis | Anchor point | 1-to-many | EG0011G02380 EG0006G13540 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G13540 | 1 | ||
Tree-based ortholog | many-to-1 | EG0006G13540 | 1 | ||
Fragaria vesca | Anchor point | 1-to-1 | FV2G38470 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G38470 | 1 | ||
Tree-based ortholog | many-to-1 | FV2G38470 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G26950 GM03G15020 GM04G02610 ... | 16 | |
Anchor point | 1-to-many | GM17G37770 GM06G02650 GM04G02610 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G03020 GM15G13970 | 2 | ||
Tree-based ortholog | many-to-many | GM14G40380 GM17G37770 GM04G02610 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G12340 GR03G12630 GR03G15910 ... | 17 | |
Anchor point | 1-to-many | GR10G00380 GR09G19450 GR12G14700 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G00380 | 1 | ||
Tree-based ortholog | many-to-many | GR10G00380 GR09G19450 GR02G12340 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ4G004770 LJ4G045730 LJ4G051290 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G004770 | 1 | ||
Tree-based ortholog | many-to-many | LJ4G041450 LJ1G054420 LJ1G064570 ... | 4 | ||
Malus domestica | Anchor point | 1-to-1 | MD08G000880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD08G000880 | 1 | ||
Tree-based ortholog | many-to-many | MD08G000880 MD00G263580 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02765G00090 ME02960G00340 ME03150G00640 ... | 12 | |
Anchor point | 1-to-1 | ME07012G00470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07012G00470 | 1 | ||
Tree-based ortholog | many-to-1 | ME07012G00470 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G101130 MT2G031310 MT3G113970 ... | 9 | |
Anchor point | 1-to-1 | MT3G113970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G031310 | 1 | ||
Tree-based ortholog | many-to-1 | MT3G113970 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G07060 OS03G01530 OS03G45920 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G46000 | 1 | ||
Tree-based ortholog | many-to-many | OS07G38730 OS03G11970 OS03G51600 ... | 5 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G04460 | 1 | |
Tree-based ortholog | many-to-many | OL08G03660 OL12G01340 OL02G02120 ... | 4 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00218G00030 PP00252G00350 PP00093G00690 ... | 6 | |
Tree-based ortholog | many-to-many | PP00215G00280 PP00215G00270 PP00341G00090 ... | 18 | ||
Prunus persica | Anchor point | 1-to-1 | PPE_001G37330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G37330 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_001G37330 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC27798G00230 RC28102G00020 RC29751G00270 ... | 8 | |
Anchor point | 1-to-1 | RC30170G05480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G05480 | 1 | ||
Tree-based ortholog | many-to-1 | RC30170G05480 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G025730 SL03G118760 SL04G081490 ... | 9 | |
Anchor point | 1-to-many | SL12G089310 SL04G081490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G081490 | 1 | ||
Tree-based ortholog | many-to-1 | SL04G081490 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G014260 ST03G032250 ST04G034870 ... | 9 | |
Anchor point | 1-to-many | ST04G034870 ST12G027490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G034870 | 1 | ||
Tree-based ortholog | many-to-1 | ST04G034870 | 1 | ||
Thellungiella parvula | Anchor point | 1-to-many | TP2G09180 TP5G30900 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G30900 | 1 | ||
Tree-based ortholog | many-to-1 | TP5G30900 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0003G05420 TC0003G17890 TC0003G27280 ... | 11 | |
Anchor point | 1-to-1 | TC0008G04330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G04330 | 1 | ||
Tree-based ortholog | many-to-1 | TC0008G04330 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G03620 | 1 | |
Anchor point | 1-to-1 | VV18G10640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G06500 | 1 | ||
Tree-based ortholog | many-to-1 | VV18G13990 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G00500 ZM01G48220 ZM01G52790 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G20150 | 1 | ||
Tree-based ortholog | many-to-many | ZM07G25130 ZM02G37450 ZM09G25770 ... | 20 |