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Integrative Orthology Viewer:
PT01G47180
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G47180 PT02G23370 PT06G00050 ... | 5 |  |
| Anchor point | PT06G00050 PT11G16860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT01G47180 PT11G16860 | 2 | ||
| Tree-based ortholog | PT01G47180 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00061G00360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00061G00360 | 1 | ||
| Tree-based ortholog | 1-to-many | ATR_00010G01740 ATR_00061G00360 | 2 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G37810 AL1G50300 AL2G27050 | 3 | |
| Anchor point | many-to-1 | AL1G50300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G13860 | 1 | ||
| Tree-based ortholog | 1-to-many | AL3G13860 AL1G50300 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G36070 AT1G55680 AT3G13340 ... | 4 | |
| Anchor point | many-to-many | AT1G55680 AT5G56190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G13340 | 1 | ||
| Tree-based ortholog | 1-to-many | AT3G13340 AT1G55680 | 2 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV1G11250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G00770 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV1G11260 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G14180 BR03G33460 BR05G29660 ... | 6 | |
| Anchor point | many-to-many | BR10G09500 BR03G33460 BR02G14180 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G33460 | 1 | ||
| Tree-based ortholog | 1-to-many | BR05G29640 BR05G29660 BR03G33460 ... | 5 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G42080 CRU_003G12190 CRU_008G16090 | 3 | |
| Anchor point | many-to-many | CRU_001G42080 CRU_008G16090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G12190 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_003G12190 CRU_001G42080 | 2 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00012G00730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00012G00730 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00012G00730 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR09G06070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR09G06070 | 1 | ||
| Tree-based ortholog | 1-to-many | CR09G06070 CR06G10430 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL10G03720 CL11G09510 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G03720 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL10G03720 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00007G04280 CS00013G02660 | 2 | |
| Anchor point | many-to-1 | CS00013G02660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00013G02660 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00013G02660 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00021G04480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00021G04480 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00021G04480 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0005G31980 EG0006G31060 EG0008G04010 | 3 | |
| Anchor point | many-to-1 | EG0006G31060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0005G31980 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0006G31060 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G19060 | 1 | |
| Anchor point | many-to-1 | FV3G34650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G34650 | 1 | ||
| Tree-based ortholog | 1-to-many | FV5G19050 FV3G34650 | 2 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G10780 GM04G12500 GM07G40060 ... | 7 | |
| Anchor point | many-to-1 | GM04G12500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM15G12980 GM09G02070 | 2 | ||
| Tree-based ortholog | 1-to-1 | GM04G12500 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G12780 GR06G22690 GR07G12680 ... | 6 | |
| Anchor point | many-to-1 | GR09G45480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR09G45470 GR09G45480 | 2 | ||
| Tree-based ortholog | 1-to-many | GR09G45470 GR09G45480 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G028030 | 1 | |
| Anchor point | many-to-1 | LJ3G028030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G028030 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ3G028030 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G072840 MD00G135330 MD00G241080 ... | 5 | |
| Anchor point | many-to-many | MD11G003580 MD03G003190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD03G003190 | 1 | ||
| Tree-based ortholog | 1-to-1 | MD15G013250 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME09507G00010 ME12455G00450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME09507G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME09507G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G010010 MT3G074070 MT7G022190 | 3 | |
| Anchor point | many-to-1 | MT3G010010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G010010 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT3G010010 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G26870 | 1 | |
| Anchor point | many-to-1 | OS08G38880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G48964 | 1 | ||
| Tree-based ortholog | 1-to-many | OS02G48964 OS08G38880 OS06G07540 ... | 5 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL10G00240 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00376G00320 PP00032G00970 | 2 | |
| Tree-based ortholog | 1-to-many | PP00032G00970 PP00376G00320 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G51770 PPE_006G03880 | 2 | |
| Anchor point | many-to-1 | PPE_006G03880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G03880 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_006G03880 | 1 | ||
| Ricinus communis | Anchor point | many-to-1 | RC28657G00180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29805G00760 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC28657G00190 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G098330 SL10G005730 SL12G098690 | 3 | |
| Anchor point | many-to-many | SL10G005730 SL07G066130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G005730 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL10G005730 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST09G031300 ST10G005870 ST12G030550 | 3 | |
| Anchor point | many-to-many | ST07G027700 ST10G005870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G005870 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST10G005870 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G41290 TP3G11540 TP5G33200 | 3 | |
| Anchor point | many-to-many | TP6G18040 TP7G24380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G11540 | 1 | ||
| Tree-based ortholog | 1-to-many | TP3G11540 TP1G41290 | 2 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0004G19170 TC0008G10640 | 2 | |
| Anchor point | many-to-1 | TC0007G00160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0007G00160 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0007G00160 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV18G03330 VV19G06770 | 2 | |
| Anchor point | many-to-1 | VV19G06770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV19G06770 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV19G06770 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM01G16950 | 1 | |
| Anchor point | many-to-1 | ZM05G38830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G38830 ZM04G22940 | 2 | ||
| Tree-based ortholog | 1-to-1 | ZM09G08380 | 1 |